Miyakogusa Predicted Gene
- Lj1g3v2095550.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj1g3v2095550.1 Non Chatacterized Hit- tr|J3MR49|J3MR49_ORYBR
Uncharacterized protein OS=Oryza brachyantha GN=OB08G1,25.55,1e-17,no
description,NULL; coiled-coil,NULL; KH_TYPE_1,K Homology domain, type
1; Eukaryotic type KH-domai,CUFF.28458.1
(2052 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|FS345776 similar to UniRef100_A7NUF5 Cluster: Chromosom... 839 0.0
gnl|LJGI|TC62167 similar to UniRef100_A7NUF5 Cluster: Chromosome... 755 0.0
gnl|LJGI|FS318846 similar to UniRef100_A7NUF5 Cluster: Chromosom... 589 e-167
gnl|LJGI|GO037186 similar to UniRef100_A7NUF5 Cluster: Chromosom... 573 e-162
gnl|LJGI|FS326845 212 6e-54
gnl|LJGI|AV765671 similar to UniRef100_A7NUF5 Cluster: Chromosom... 135 1e-30
>gnl|LJGI|FS345776 similar to UniRef100_A7NUF5 Cluster: Chromosome chr18 scaffold_1,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr18 scaffold_1, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (16%)
Length = 587
Score = 839 bits (423), Expect = 0.0
Identities = 432/435 (99%)
Strand = Plus / Minus
Query: 1618 ggttttccccttgatgatcgccctccttttatgaataatatacacagatcaggcattcct 1677
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 587 ggttttccccttgatgatcgccctccttttatgaataatatacacagatcaggcattcct 528
Query: 1678 cctcacattgctgaaaggaagccttggggtcctcaggggatacttgaaggtggtggacac 1737
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 527 cctcacattgctgaaaggaagccttggggtcctcaggggatacttgaaggtggtggacac 468
Query: 1738 atgggcttgccagactttgccggaggtcctcctagaagaattttgggatttggaggaggg 1797
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 467 atgggcttgccagactttgccggaggtcctcctagaagaattttgggatttggaggaggg 408
Query: 1798 aaccaaccgattatcactcacacaagtgccactgtcgaagttgttgttcctcgagcggtg 1857
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 407 aaccaaccgattatcactcacacaagtgcccctgtcgaagttgttgttcctcgagcggtg 348
Query: 1858 gtgcctgaaatatatggggaagatggtgaatgcctgagacaaatacttcagatctctgat 1917
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 347 gtgcctgaaatatatggggaagatggtgaatgcctgagacaaatacttcagatctttgat 288
Query: 1918 gcaaagattatgattactgatccaaagcccggagctgtggaaactaaaattataatttct 1977
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 287 gcaaagattatgattactgatccaaagcccggagctgtggaaactaaaattataatttct 228
Query: 1978 ggaaccccagagcaaactcatgctgcacaaagtcttattcaggcgtttgtcatgagtgag 2037
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 227 ggaaccccagagcaaactcatgctgcacaaagttttattcaggcgtttgtcatgagtgag 168
Query: 2038 agggattctggttga 2052
|||||||||||||||
Sbjct: 167 agggattctggttga 153
>gnl|LJGI|TC62167 similar to UniRef100_A7NUF5 Cluster: Chromosome chr18 scaffold_1,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr18 scaffold_1, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (16%)
Length = 792
Score = 755 bits (381), Expect = 0.0
Identities = 388/389 (99%), Gaps = 1/389 (0%)
Strand = Plus / Plus
Query: 323 ctagtaatgatgagactgagagcaaagggaagggtgatgaggaggaagaggctgaagaaa 382
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 404 ctagtaatgatgagactgagagcaaagggaagggtgatgaggaggaagaggctgaagaaa 463
Query: 383 agggtggtgataatgatgatgttgaagataaagaggttgaagattcgcagggcgagaagg 442
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 464 agggtggtgataatgatgatgttgaagataaagaggttgaagattcgcagggcgagaagg 523
Query: 443 cgaattcgaattcggttattcattcggctattcggaaggctctgtcattagtttttgata 502
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 524 cgaattcgaattcggttattcattcggctattcggaaggctctgtcattagtttttgata 583
Query: 503 ggatggttgaaggagtggaggatacagctgatggtgatgaagaaagtggtaaagcttctt 562
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 584 ggatggttgaaggagtggaggatacagctgatggtgatgaagaaagtggtaaagcttctt 643
Query: 563 cgtttgtgtttaggctgctgatcctttctaatcaagttggctgccttctgggtaagggt- 621
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 644 cgtttgtgtttaggctgctgatcctttctaatcaagttggctgccttctgggtaagggtg 703
Query: 622 gggagtgtgatcaagaaaatgtcagctgaaagcggggcgcagattcggattcttcctaaa 681
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 704 gggagtgtgatcaagaaaatgtcagctgaaagcggggcgcagattcggattcttcctaaa 763
Query: 682 gataaacttcctgtgtgtgcttcagcatc 710
|||||||||||||||||||||||||||||
Sbjct: 764 gataaacttcctgtgtgtgcttcagcatc 792
Score = 517 bits (261), Expect = e-146
Identities = 261/261 (100%)
Strand = Plus / Plus
Query: 1 atggcttcttccaagagaccgaatgcggagtcgaagaggaaagggaaacgccagaaatcc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 82 atggcttcttccaagagaccgaatgcggagtcgaagaggaaagggaaacgccagaaatcc 141
Query: 61 ggtggtggtggttcttcatcgttggatgcggctgctggcggtgttgttttccgtatgctc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 142 ggtggtggtggttcttcatcgttggatgcggctgctggcggtgttgttttccgtatgctc 201
Query: 121 tgccctgctactagaataggcggtgtaatcggcaaaggtggtggcatcatatcacaaatt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 202 tgccctgctactagaataggcggtgtaatcggcaaaggtggtggcatcatatcacaaatt 261
Query: 181 cgccaggaaaccggtgtcaatattaagattgacgagcctacacctggttgtgatgagagg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 262 cgccaggaaaccggtgtcaatattaagattgacgagcctacacctggttgtgatgagagg 321
Query: 241 gttatcattttctcgggttct 261
|||||||||||||||||||||
Sbjct: 322 gttatcattttctcgggttct 342
>gnl|LJGI|FS318846 similar to UniRef100_A7NUF5 Cluster: Chromosome chr18 scaffold_1,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr18 scaffold_1, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (12%)
Length = 695
Score = 589 bits (297), Expect = e-167
Identities = 297/297 (100%)
Strand = Plus / Plus
Query: 323 ctagtaatgatgagactgagagcaaagggaagggtgatgaggaggaagaggctgaagaaa 382
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 399 ctagtaatgatgagactgagagcaaagggaagggtgatgaggaggaagaggctgaagaaa 458
Query: 383 agggtggtgataatgatgatgttgaagataaagaggttgaagattcgcagggcgagaagg 442
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 459 agggtggtgataatgatgatgttgaagataaagaggttgaagattcgcagggcgagaagg 518
Query: 443 cgaattcgaattcggttattcattcggctattcggaaggctctgtcattagtttttgata 502
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 519 cgaattcgaattcggttattcattcggctattcggaaggctctgtcattagtttttgata 578
Query: 503 ggatggttgaaggagtggaggatacagctgatggtgatgaagaaagtggtaaagcttctt 562
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 579 ggatggttgaaggagtggaggatacagctgatggtgatgaagaaagtggtaaagcttctt 638
Query: 563 cgtttgtgtttaggctgctgatcctttctaatcaagttggctgccttctgggtaagg 619
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 639 cgtttgtgtttaggctgctgatcctttctaatcaagttggctgccttctgggtaagg 695
Score = 517 bits (261), Expect = e-146
Identities = 261/261 (100%)
Strand = Plus / Plus
Query: 1 atggcttcttccaagagaccgaatgcggagtcgaagaggaaagggaaacgccagaaatcc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 83 atggcttcttccaagagaccgaatgcggagtcgaagaggaaagggaaacgccagaaatcc 142
Query: 61 ggtggtggtggttcttcatcgttggatgcggctgctggcggtgttgttttccgtatgctc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 143 ggtggtggtggttcttcatcgttggatgcggctgctggcggtgttgttttccgtatgctc 202
Query: 121 tgccctgctactagaataggcggtgtaatcggcaaaggtggtggcatcatatcacaaatt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 203 tgccctgctactagaataggcggtgtaatcggcaaaggtggtggcatcatatcacaaatt 262
Query: 181 cgccaggaaaccggtgtcaatattaagattgacgagcctacacctggttgtgatgagagg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 263 cgccaggaaaccggtgtcaatattaagattgacgagcctacacctggttgtgatgagagg 322
Query: 241 gttatcattttctcgggttct 261
|||||||||||||||||||||
Sbjct: 323 gttatcattttctcgggttct 343
>gnl|LJGI|GO037186 similar to UniRef100_A7NUF5 Cluster: Chromosome chr18 scaffold_1,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr18 scaffold_1, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (13%)
Length = 290
Score = 573 bits (289), Expect = e-162
Identities = 289/289 (100%)
Strand = Plus / Plus
Query: 1333 ggtgcccatatccgtatattaggaaaggataagattcctaagtgtgcttcagaaaatgaa 1392
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2 ggtgcccatatccgtatattaggaaaggataagattcctaagtgtgcttcagaaaatgaa 61
Query: 1393 gaagtaattcagataactggagaaattgaggcagtgcatgatgctcttttgcaaataacc 1452
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 62 gaagtaattcagataactggagaaattgaggcagtgcatgatgctcttttgcaaataacc 121
Query: 1453 acaagattaaaacatcatttctttcgtgatgcatatccatctgccaattatccttcaaat 1512
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122 acaagattaaaacatcatttctttcgtgatgcatatccatctgccaattatccttcaaat 181
Query: 1513 cctgcatttttagataaccttcctccattcctgccttatttggggaggcgagggatttca 1572
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 182 cctgcatttttagataaccttcctccattcctgccttatttggggaggcgagggatttca 241
Query: 1573 cctcctggaatgtattctgatctaggtccaccacctccacatgcgggtt 1621
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 242 cctcctggaatgtattctgatctaggtccaccacctccacatgcgggtt 290
>gnl|LJGI|FS326845
Length = 575
Score = 212 bits (107), Expect = 6e-54
Identities = 138/147 (93%), Gaps = 1/147 (0%)
Strand = Plus / Plus
Query: 1906 cagatctctgatgcaaagattatgattactgatccaaagcccggagctgtggaaactaaa 1965
||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 289 cagatctctaatgcaaagattatgattattgatccaaagcccggagctgtggaaactaag 348
Query: 1966 attataatttctggaaccccagagcaaactcatgctgcacaaagtcttattcaggcgttt 2025
||||||||||||||||||||| |||||| |||||||||||||||||||||||| ||||||
Sbjct: 349 attataatttctggaaccccatagcaaa-tcatgctgcacaaagtcttattcatgcgttt 407
Query: 2026 gtcatgagtgagagggattctggttga 2052
|||||||||||||||||| ||||||
Sbjct: 408 aacatgagtgagagggattcaggttga 434
>gnl|LJGI|AV765671 similar to UniRef100_A7NUF5 Cluster: Chromosome chr18 scaffold_1,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr18 scaffold_1, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (3%)
Length = 398
Score = 135 bits (68), Expect = 1e-30
Identities = 92/99 (92%), Gaps = 2/99 (2%)
Strand = Plus / Minus
Query: 1954 gtggaaactaaaattataatttctggaaccccagagcaaactcatgctgcacaaagtctt 2013
||||||||||||||| |||||||||||||| ||||||||||||||||||||||||| ||
Sbjct: 364 gtggaaactaaaattgtaatttctggaacc--agagcaaactcatgctgcacaaagtttt 307
Query: 2014 attcaggcgtttgtcatgagtgagagggattctggttga 2052
|||||||| || |||| ||||||||||||||||||||||
Sbjct: 306 attcaggcattggtcacgagtgagagggattctggttga 268