Miyakogusa Predicted Gene
- Lj1g3v2069890.2
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj1g3v2069890.2 tr|Q6NNL9|Q6NNL9_ARATH At5g11630 OS=Arabidopsis
thaliana GN=At5g11630 PE=4 SV=1,56.04,1e-18,seg,NULL,CUFF.28418.2
(279 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC67815 similar to UniRef100_Q2V3H8 Cluster: Uncharacte... 553 e-157
gnl|LJGI|TC64682 496 e-140
gnl|LJGI|AV766726 210 3e-54
>gnl|LJGI|TC67815 similar to UniRef100_Q2V3H8 Cluster: Uncharacterized protein
At4g17310.2; n=1; Arabidopsis thaliana|Rep:
Uncharacterized protein At4g17310.2 - Arabidopsis
thaliana (Mouse-ear cress), partial (45%)
Length = 561
Score = 553 bits (279), Expect = e-157
Identities = 279/279 (100%)
Strand = Plus / Plus
Query: 1 atggcttctcgttacagatcattctcgcaaccagcaatgtccctcatcaaatccaccatc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 34 atggcttctcgttacagatcattctcgcaaccagcaatgtccctcatcaaatccaccatc 93
Query: 61 accaaacccaccaccaatcccaagccttcaccattcctcttcaaaacccgttcttcttct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 94 accaaacccaccaccaatcccaagccttcaccattcctcttcaaaacccgttcttcttct 153
Query: 121 tcttctacgaggtcggttgctgagctcggttgcgtgcagtcgctgcttcccctgcactct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 154 tcttctacgaggtcggttgctgagctcggttgcgtgcagtcgctgcttcccctgcactct 213
Query: 181 gcggtgtcgtcagctcgcctcacctcttgtctcggcattgattcgaggacctcgaggtcg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 214 gcggtgtcgtcagctcgcctcacctcttgtctcggcattgattcgaggacctcgaggtcg 273
Query: 241 ttgtctcaggaaatgggtctcagcacaccgcgataagag 279
|||||||||||||||||||||||||||||||||||||||
Sbjct: 274 ttgtctcaggaaatgggtctcagcacaccgcgataagag 312
>gnl|LJGI|TC64682
Length = 683
Score = 496 bits (250), Expect = e-140
Identities = 250/250 (100%)
Strand = Plus / Plus
Query: 1 atggcttctcgttacagatcattctcgcaaccagcaatgtccctcatcaaatccaccatc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 87 atggcttctcgttacagatcattctcgcaaccagcaatgtccctcatcaaatccaccatc 146
Query: 61 accaaacccaccaccaatcccaagccttcaccattcctcttcaaaacccgttcttcttct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 147 accaaacccaccaccaatcccaagccttcaccattcctcttcaaaacccgttcttcttct 206
Query: 121 tcttctacgaggtcggttgctgagctcggttgcgtgcagtcgctgcttcccctgcactct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 207 tcttctacgaggtcggttgctgagctcggttgcgtgcagtcgctgcttcccctgcactct 266
Query: 181 gcggtgtcgtcagctcgcctcacctcttgtctcggcattgattcgaggacctcgaggtcg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 267 gcggtgtcgtcagctcgcctcacctcttgtctcggcattgattcgaggacctcgaggtcg 326
Query: 241 ttgtctcagg 250
||||||||||
Sbjct: 327 ttgtctcagg 336
Score = 58.0 bits (29), Expect = 3e-08
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 251 aaatgggtctcagcacaccgcgataagag 279
|||||||||||||||||||||||||||||
Sbjct: 406 aaatgggtctcagcacaccgcgataagag 434
>gnl|LJGI|AV766726
Length = 610
Score = 210 bits (106), Expect = 3e-54
Identities = 106/106 (100%)
Strand = Plus / Minus
Query: 145 ctcggttgcgtgcagtcgctgcttcccctgcactctgcggtgtcgtcagctcgcctcacc 204
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 610 ctcggttgcgtgcagtcgctgcttcccctgcactctgcggtgtcgtcagctcgcctcacc 551
Query: 205 tcttgtctcggcattgattcgaggacctcgaggtcgttgtctcagg 250
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 550 tcttgtctcggcattgattcgaggacctcgaggtcgttgtctcagg 505