Miyakogusa Predicted Gene
- Lj1g3v2068750.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj1g3v2068750.1 Non Chatacterized Hit- tr|I3T5J8|I3T5J8_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2 SV=1,99.36,0,SUBFAMILY
NOT NAMED,NULL; UNCHARACTERIZED,Transcriptional regulator TACO1-like;
Transcrip_reg_TACO1,,CUFF.28400.1
(942 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC71754 similar to UniRef100_O82314 Cluster: UPF0082 pr... 1859 0.0
gnl|LJGI|AV773633 similar to UniRef100_O82314 Cluster: UPF0082 p... 228 5e-59
gnl|LJGI|TC74285 similar to UniRef100_O82314 Cluster: UPF0082 pr... 105 5e-22
gnl|LJGI|TC75512 101 8e-21
gnl|LJGI|FS327202 82 7e-15
>gnl|LJGI|TC71754 similar to UniRef100_O82314 Cluster: UPF0082 protein At2g25830; n=1;
Arabidopsis thaliana|Rep: UPF0082 protein At2g25830 -
Arabidopsis thaliana (Mouse-ear cress), partial (79%)
Length = 1413
Score = 1859 bits (938), Expect = 0.0
Identities = 941/942 (99%)
Strand = Plus / Plus
Query: 1 atgagagcattcagagcacttcttcagcttaacactctctccaacctcgtttcctccacg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 135 atgagagcattcagagcacttcttcagcttaacactctctccaacctcgtttcctccacg 194
Query: 61 cgcctcactctccaccttcccaggaataatcatgtgctgaacaagagcttattgttgtgg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 195 cgcctcactctccaccttcccaggaataatcatgtgctgaacaagagcttattgttgtgg 254
Query: 121 gatgcaactgcaaatgcaacgtttactggtagttctcaagtcaggaagatttcgactacc 180
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 255 gatgcaactgcaaatgcaacgtttactggtagttctcaagtcaggaagatttggactacc 314
Query: 181 tcatttgtttgtatgggcaggcgttccagcaaaattgctcgcagaaagggaacccaagat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 315 tcatttgtttgtatgggcaggcgttccagcaaaattgctcgcagaaagggaacccaagat 374
Query: 241 gtaaaaagggcaaagctgtactcaaggattggaaagaaagttgtgtctgctgtaaagaaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 375 gtaaaaagggcaaagctgtactcaaggattggaaagaaagttgtgtctgctgtaaagaaa 434
Query: 301 ggtggtccaaatgtagcaacaaattcagacttggctgctgtgcttgagaaagcaaaggag 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 435 ggtggtccaaatgtagcaacaaattcagacttggctgctgtgcttgagaaagcaaaggag 494
Query: 361 cttgacgtgcctaaagatattattgagcgtaacatcaaaagagcatctgagaagggacaa 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 495 cttgacgtgcctaaagatattattgagcgtaacatcaaaagagcatctgagaagggacaa 554
Query: 421 gaggcttatattgagaaaacctatgaggtatatggctatggaggagttagtatagtagtt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 555 gaggcttatattgagaaaacctatgaggtatatggctatggaggagttagtatagtagtt 614
Query: 481 gaggtatcaactgataaaataaatcgttcggtggcaaagattagggaagtggtaagggat 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 615 gaggtatcaactgataaaataaatcgttcggtggcaaagattagggaagtggtaagggat 674
Query: 541 tatggaggaaagatggcagatcctggatctgtgatgtttaagtttagacgtgctcgggta 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 675 tatggaggaaagatggcagatcctggatctgtgatgtttaagtttagacgtgctcgggta 734
Query: 601 gtaaatattaaagtcaccaatgctgacaaagatcagctgcttgctattgctttagatgct 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 735 gtaaatattaaagtcaccaatgctgacaaagatcagctgcttgctattgctttagatgct 794
Query: 661 ggagctgaggatgtaattgatcctccaacttacgaagaagacactgaagaggatgagtca 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 795 ggagctgaggatgtaattgatcctccaacttacgaagaagacactgaagaggatgagtca 854
Query: 721 gaaagatattataaaattgtgggttcttcggagaactactcatctatactatcgaaactg 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 855 gaaagatattataaaattgtgggttcttcggagaactactcatctatactatcgaaactg 914
Query: 781 cgagaggagggcatagattttgtgcctgatagtggttctgagcttcttccaaatgccaca 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 915 cgagaggagggcatagattttgtgcctgatagtggttctgagcttcttccaaatgccaca 974
Query: 841 attgaggtagacgatgaggctatggacttgaacaaggaacttatgagcaatttacttgaa 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 975 attgaggtagacgatgaggctatggacttgaacaaggaacttatgagcaatttacttgaa 1034
Query: 901 cttgatgacgttgatgctgtttatacagaccagaaatagtca 942
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1035 cttgatgacgttgatgctgtttatacagaccagaaatagtca 1076
>gnl|LJGI|AV773633 similar to UniRef100_O82314 Cluster: UPF0082 protein At2g25830;
n=1; Arabidopsis thaliana|Rep: UPF0082 protein At2g25830
- Arabidopsis thaliana (Mouse-ear cress), partial (11%)
Length = 465
Score = 228 bits (115), Expect = 5e-59
Identities = 157/167 (94%), Gaps = 3/167 (1%)
Strand = Plus / Minus
Query: 769 ctatcgaaactgcgagaggagggcatagattttgtgcctgatagtggttctgagcttctt 828
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 465 ctatcgaaaccgcgagaggagggcatagattttgtgcctgatagtggttctgagcttctt 406
Query: 829 ccaaatgccacaattgaggtagacgatgaggctatggacttgaacaaggaa-cttatgag 887
|| | |||| ||||||||||||||||||||||||||||||||| ||||| ||||||||
Sbjct: 405 cccatgcccaccattgaggtagacgatgaggctatggacttgaaccaggaaccttatgag 346
Query: 888 caattta-cttgaacttgatga-cgttgatgctgtttatacagacca 932
||||||| |||||||||||||| ||||||||||||||||||||||||
Sbjct: 345 caatttaccttgaacttgatgagcgttgatgctgtttatacagacca 299
>gnl|LJGI|TC74285 similar to UniRef100_O82314 Cluster: UPF0082 protein At2g25830;
n=1; Arabidopsis thaliana|Rep: UPF0082 protein At2g25830
- Arabidopsis thaliana (Mouse-ear cress), partial (9%)
Length = 576
Score = 105 bits (53), Expect = 5e-22
Identities = 78/85 (91%), Gaps = 1/85 (1%)
Strand = Plus / Plus
Query: 764 ctatactatcgaaactgcgagaggagggcatagattttgtgcctgatagtggttctgagc 823
||||||||||||||||||||||||||| |||||| |||||| |||| |||||||||||||
Sbjct: 26 ctatactatcgaaactgcgagaggaggacataga-tttgtgtctgacagtggttctgagc 84
Query: 824 ttcttccaaatgccacaattgaggt 848
||||||| ||| ||||||||||||
Sbjct: 85 ttcttccgaatatcacaattgaggt 109
>gnl|LJGI|TC75512
Length = 908
Score = 101 bits (51), Expect = 8e-21
Identities = 67/71 (94%), Gaps = 1/71 (1%)
Strand = Plus / Plus
Query: 764 ctatactatcgaaactgcgagaggagggcatagattttgtgcctgatagtggttctgagc 823
||||||||||||||||| |||||||||||||||||| |||| |||||||||||||||||
Sbjct: 564 ctatactatcgaaactgtcagaggagggcatagattt-gtgcgtgatagtggttctgagc 622
Query: 824 ttcttccaaat 834
|||||||||||
Sbjct: 623 ttcttccaaat 633
>gnl|LJGI|FS327202
Length = 589
Score = 81.8 bits (41), Expect = 7e-15
Identities = 57/61 (93%), Gaps = 1/61 (1%)
Strand = Plus / Plus
Query: 774 gaaactgcgagaggagggcatagattttgtgcctgatagtggttctgagcttcttccaaa 833
||||||| || |||||||||||||||| |||| |||||||||||||||||||||||||||
Sbjct: 419 gaaactgtgataggagggcatagattt-gtgcgtgatagtggttctgagcttcttccaaa 477
Query: 834 t 834
|
Sbjct: 478 t 478