Miyakogusa Predicted Gene

Lj1g3v2068690.1

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj1g3v2068690.1 Non Chatacterized Hit- tr|H2PDW0|H2PDW0_PONAB
Uncharacterized protein OS=Pongo abelii GN=HERC5 PE=4
,33.98,1e-18,RCC1/BLIP-II,Regulator of chromosome
condensation/beta-lactamase-inhibitor protein II;
RCC1,Regulato,CUFF.28396.1
         (1416 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|BI418290 weakly similar to UniRef100_Q1H8M4 Cluster: Re...   771   0.0  
gnl|LJGI|AU251645 similar to UniRef100_Q1H8M4 Cluster: Regulator...   145   9e-34
gnl|LJGI|TC69859 similar to UniRef100_A5C6E2 Cluster: Malate deh...   137   2e-31

>gnl|LJGI|BI418290 weakly similar to UniRef100_Q1H8M4 Cluster: Regulator of chromosome
           condensation family protein; n=1; Beta vulgaris|Rep:
           Regulator of chromosome condensation family protein -
           Beta vulgaris (Sugar beet), partial (22%)
          Length = 397

 Score =  771 bits (389), Expect = 0.0
 Identities = 395/397 (99%)
 Strand = Plus / Plus

                                                                       
Query: 553 actcgcaaaaagaatcctgatgacgcatcagaaagcatttgctggacctttggtcgaggg 612
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1   actcgcaaaaagaatcctgatgacgcatcagaaagcatttgctggacctttggtcgaggg 60

                                                                       
Query: 613 gataatggccaactcgggcacggaacaacgcaaagcactttgcttcctacaccggtaata 672
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61  gataatggccaactcgggcacggaacaacgcaaagcactttgcttcctacaccggtaata 120

                                                                       
Query: 673 gaattgccagaaaatgtacatcttgtttgtgttgactgtggtttgtttcatactagtgtt 732
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 121 gaattgccagaaaatgtacatcttgtttgtgttgactgtggtttgtttcatactagtggt 180

                                                                       
Query: 733 gtttcctctgccggggatgtgtggtcatggggaatgcagaagggtcttggcttatgccct 792
           ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 181 gtttcctctgccggggatgtgtggtcatggggaatgcagaagggtctcggcttatgccct 240

                                                                       
Query: 793 gatgttagtcgcgctgaatcagattctggtgatgcactcaatccccgtctcatctcatgc 852
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 gatgttagtcgcgctgaatcagattctggtgatgcactcaatccccgtctcatctcatgc 300

                                                                       
Query: 853 gaacctcatcaacccaagtttcctgatccagataaagtcgtgtgtggggcggcacatact 912
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 gaacctcatcaacccaagtttcctgatccagataaagtcgtgtgtggggcggcacatact 360

                                                
Query: 913 gttgttgttgggcaggaaggttataaggtttgggctt 949
           |||||||||||||||||||||||||||||||||||||
Sbjct: 361 gttgttgttgggcaggaaggttataaggtttgggctt 397


>gnl|LJGI|AU251645 similar to UniRef100_Q1H8M4 Cluster: Regulator of chromosome
           condensation family protein; n=1; Beta vulgaris|Rep:
           Regulator of chromosome condensation family protein -
           Beta vulgaris (Sugar beet), partial (13%)
          Length = 392

 Score =  145 bits (73), Expect = 9e-34
 Identities = 73/73 (100%)
 Strand = Plus / Plus

                                                                       
Query: 5   atggtcaacttggtaacaatggagaggactcaaatgaagaaaaatacacggagggagatt 64
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 atggtcaacttggtaacaatggagaggactcaaatgaagaaaaatacacggagggagatt 379

                        
Query: 65  attctttagtacc 77
           |||||||||||||
Sbjct: 380 attctttagtacc 392


>gnl|LJGI|TC69859 similar to UniRef100_A5C6E2 Cluster: Malate dehydrogenase; n=1;
           Vitis vinifera|Rep: Malate dehydrogenase - Vitis
           vinifera (Grape), partial (10%)
          Length = 796

 Score =  137 bits (69), Expect = 2e-31
 Identities = 120/137 (87%)
 Strand = Plus / Plus

                                                                       
Query: 760 tggggaatgcagaagggtcttggcttatgccctgatgttagtcgcgctgaatcagattct 819
           ||||||||| |||| ||||| ||||||||||||| || |||||| |||||  ||||||||
Sbjct: 33  tggggaatggagaaaggtctcggcttatgccctggtgctagtcgtgctgatccagattct 92

                                                                       
Query: 820 ggtgatgcactcaatccccgtctcatctcatgcgaacctcatcaacccaagtttcctgat 879
           |||||||| |||  | ||||||||||||||||| | || ||||||||||| ||||| |||
Sbjct: 93  ggtgatgccctctcttcccgtctcatctcatgcaatccacatcaacccaattttccagat 152

                            
Query: 880 ccagataaagtcgtgtg 896
           |||||||||||||||||
Sbjct: 153 ccagataaagtcgtgtg 169