Miyakogusa Predicted Gene
- Lj1g3v2067550.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj1g3v2067550.1 tr|B9H8Z4|B9H8Z4_POPTR Predicted protein
OS=Populus trichocarpa GN=POPTRDRAFT_1081499 PE=4
SV=1,71.96,0,Exostosin,Exostosin-like; seg,NULL; EXOSTOSIN FAMILY
PROTEIN,NULL; EXOSTOSIN (HEPARAN SULFATE GLYCOS,CUFF.28417.1
(1881 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|FS351364 similar to UniRef100_A7P576 Cluster: Chromosom... 1300 0.0
gnl|LJGI|FS324946 similar to UniRef100_Q3S2E2 Cluster: Uncharact... 1138 0.0
gnl|LJGI|FS348486 similar to UniRef100_A7P576 Cluster: Chromosom... 84 4e-15
gnl|LJGI|TC65655 similar to UniRef100_A7P576 Cluster: Chromosome... 84 4e-15
gnl|LJGI|TC75445 similar to UniRef100_A7PEJ3 Cluster: Chromosome... 76 9e-13
gnl|LJGI|TC73599 similar to UniRef100_A7PEJ3 Cluster: Chromosome... 64 3e-09
>gnl|LJGI|FS351364 similar to UniRef100_A7P576 Cluster: Chromosome chr4 scaffold_6,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr4 scaffold_6, whole genome shotgun sequence
- Vitis vinifera (Grape), partial (30%)
Length = 718
Score = 1300 bits (656), Expect = 0.0
Identities = 662/664 (99%)
Strand = Plus / Minus
Query: 1218 tgcagaaacgagaggccgcatgcttaattgcattagagccctctgcaacgctgacattga 1277
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 718 tgcagaaacgagaggccgcatgcttaattgcattagagccctctgcaacgctgacattga 659
Query: 1278 agtaggattcaagataggaaaggatgtttctcttgcagaaacatatataagatcagttga 1337
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 658 agtaggattcaagataggaaaggatgtttctcttgcagaaacatatataagatcagttga 599
Query: 1338 gaatcctgtcaaaaacatagggggaaaccctccttctcagaggtctatcctggctttttt 1397
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 598 gaatcctgtcaaaaacatagggggaaaccctccttctcagaggtctatcctggctttttt 539
Query: 1398 cgccggtggtttgcacggttatgttcggcctgttttgttgaagcactgggagaacaaaga 1457
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 538 cgccggtggtttgcacggttatgttcggcctgttttgttgaagcactgggagaacaaaga 479
Query: 1458 acctgacatgaaaatatttggtccattgccgcatgtcaggggtaatgccaactacctcca 1517
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 478 acctgacatgaaaatatttggtccattgccgcatgtcaggggtaatgccaactacctcca 419
Query: 1518 gttcatgaagagcagcaaattctgcatatgtgcaagaggtcatgaagttaatagcccgcg 1577
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 418 gttcatgaagagcagcaaattctgcatatgtgcaagaggtcatgaagttaatagcccgcg 359
Query: 1578 cgtggttgaggctctactctatgaatgcgttccggttatcatatctgacaattttattcc 1637
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 358 cgtggttgaggctctactctatgaatgcgttccggttatcatatctgacaattttattcc 299
Query: 1638 gcctttgttcgaggttttaaactgggaatcttttgctgtgtttgtgatggagaaagatat 1697
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 298 gcctttgttcgaggttttaaactgggaatcttttgctgtgtttgtgatggagaaaggtat 239
Query: 1698 ccctgatttgaggaacatcctgctttctatatcggaagaaaggtacttagagatgcataa 1757
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 238 ccctgatttgaggaacatcctgctttctatatcggaagaaaggtacttagagatgcataa 179
Query: 1758 gcgggtgaaaaaggtacaagagcattttctctggcatcctgagccagtaaagtatgattt 1817
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 178 gcgggtgaaaaaggtacaagagcattttttctggcatcctgagccagtaaagtatgattt 119
Query: 1818 gtttcacatgcttcttcattcaatttggtacaatagacttttccgagtaggtcagaagtg 1877
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 118 gtttcacatgcttcttcattcaatttggtacaatagacttttccgagtaggtcagaagtg 59
Query: 1878 atct 1881
||||
Sbjct: 58 atct 55
>gnl|LJGI|FS324946 similar to UniRef100_Q3S2E2 Cluster: Uncharacterized protein 1c;
n=1; SARS coronavirus ZJ0301|Rep: Uncharacterized
protein 1c - SARS coronavirus ZJ0301, partial (10%)
Length = 774
Score = 1138 bits (574), Expect = 0.0
Identities = 574/574 (100%)
Strand = Plus / Plus
Query: 1 atggatcgtggatttagatttttgtgtcaggcagaaacaaagagattgatttcattctta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 atggatcgtggatttagatttttgtgtcaggcagaaacaaagagattgatttcattctta 260
Query: 61 ggaatagctgtagctctagttctagttgttcagtattctgagcttccaaatagtaaattg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ggaatagctgtagctctagttctagttgttcagtattctgagcttccaaatagtaaattg 320
Query: 121 ttatcttctctcactgctaagatcactagtttcacaatggatatatcttcagttaattct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ttatcttctctcactgctaagatcactagtttcacaatggatatatcttcagttaattct 380
Query: 181 agaatggagggtaatgacatgcacctaaatgattcaaattcaagctctgaacatgtacca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 agaatggagggtaatgacatgcacctaaatgattcaaattcaagctctgaacatgtacca 440
Query: 241 agtagtcctcagtataccccattagatcaagttagtgcttcaattaatgcccctgctcca 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 agtagtcctcagtataccccattagatcaagttagtgcttcaattaatgcccctgctcca 500
Query: 301 gagaatgttaaagggcttggtagtgttgttatccttaataatttcacaactagagatgat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 gagaatgttaaagggcttggtagtgttgttatccttaataatttcacaactagagatgat 560
Query: 361 ggtaattcaccaatgggtagtgttgagggaaaagaaaaagatactaatttgacatcacaa 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 ggtaattcaccaatgggtagtgttgagggaaaagaaaaagatactaatttgacatcacaa 620
Query: 421 ggggttgcatcttccctgcttgcaccacaacctatggttccattgcccaacagaacaaca 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 ggggttgcatcttccctgcttgcaccacaacctatggttccattgcccaacagaacaaca 680
Query: 481 tccttggattcagaaatagattctagaagtcccatgatatctgtcatttcctctgcaact 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 tccttggattcagaaatagattctagaagtcccatgatatctgtcatttcctctgcaact 740
Query: 541 tcattggagtcaaacatgagtgatccggtccgca 574
||||||||||||||||||||||||||||||||||
Sbjct: 741 tcattggagtcaaacatgagtgatccggtccgca 774
>gnl|LJGI|FS348486 similar to UniRef100_A7P576 Cluster: Chromosome chr4 scaffold_6,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr4 scaffold_6, whole genome shotgun sequence
- Vitis vinifera (Grape), partial (18%)
Length = 489
Score = 83.8 bits (42), Expect = 4e-15
Identities = 138/170 (81%)
Strand = Plus / Minus
Query: 1507 aactacctccagttcatgaagagcagcaaattctgcatatgtgcaagaggtcatgaagtt 1566
|||||| |||||| ||||||||||||||| | |||||| || || |||| | |||||
Sbjct: 477 aactacatccagtacatgaagagcagcaagtactgcatttgcgcccgagggtacgaagta 418
Query: 1567 aatagcccgcgcgtggttgaggctctactctatgaatgcgttccggttatcatatctgac 1626
|| || |||||||| || || || | |||||||||| ||||||||||| |||| ||||
Sbjct: 417 aacagtccgcgcgtcgtggaagccatcttctatgaatgtgttccggttattatatttgac 358
Query: 1627 aattttattccgcctttgttcgaggttttaaactgggaatcttttgctgt 1676
||||| | ||||| || ||||||||||| || |||||||| ||||||||
Sbjct: 357 aatttcgtgccgccctttttcgaggttttgaattgggaatcctttgctgt 308
>gnl|LJGI|TC65655 similar to UniRef100_A7P576 Cluster: Chromosome chr4 scaffold_6,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr4 scaffold_6, whole genome shotgun sequence
- Vitis vinifera (Grape), partial (33%)
Length = 864
Score = 83.8 bits (42), Expect = 4e-15
Identities = 138/170 (81%)
Strand = Plus / Plus
Query: 1507 aactacctccagttcatgaagagcagcaaattctgcatatgtgcaagaggtcatgaagtt 1566
|||||| |||||| ||||||||||||||| | ||||| ||||||| || ||||||||
Sbjct: 310 aactacatccagtacatgaagagcagcaagtattgcatttgtgcaaaggggtatgaagtt 369
Query: 1567 aatagcccgcgcgtggttgaggctctactctatgaatgcgttccggttatcatatctgac 1626
|| || || | || |||||||| | |||||||||| ||||| ||||||||||| |||
Sbjct: 370 aacagtccaagagttgttgaggccatcttctatgaatgtgttcctgttatcatatcagac 429
Query: 1627 aattttattccgcctttgttcgaggttttaaactgggaatcttttgctgt 1676
|||||| | || || || || |||||||| || |||||||| ||||||||
Sbjct: 430 aattttgtgcctccattttttgaggttttgaattgggaatcctttgctgt 479
>gnl|LJGI|TC75445 similar to UniRef100_A7PEJ3 Cluster: Chromosome chr11 scaffold_13,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr11 scaffold_13, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (12%)
Length = 562
Score = 75.8 bits (38), Expect = 9e-13
Identities = 86/102 (84%)
Strand = Plus / Plus
Query: 1596 ctatgaatgcgttccggttatcatatctgacaattttattccgcctttgttcgaggtttt 1655
||||||||| ||||||||||| ||||||||||||||| | || || || || ||||||||
Sbjct: 13 ctatgaatgtgttccggttattatatctgacaattttgtcccaccattttttgaggtttt 72
Query: 1656 aaactgggaatcttttgctgtgtttgtgatggagaaagatat 1697
|| |||||||| |||||||| |||| ||||||| |||||
Sbjct: 73 gaattgggaatcctttgctgttattgttttggagaaggatat 114
>gnl|LJGI|TC73599 similar to UniRef100_A7PEJ3 Cluster: Chromosome chr11 scaffold_13,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr11 scaffold_13, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (22%)
Length = 489
Score = 63.9 bits (32), Expect = 3e-09
Identities = 83/100 (83%)
Strand = Plus / Plus
Query: 1127 attatgtggacaagattgctggaaagtaccctttctggaatagaacaaatggagcagatc 1186
||||||| |||| ||||||||| || | ||||||||||| |||||| || || ||||
Sbjct: 379 attatgtagacatgattgctgggaaacatcctttctggaacagaacaggaggtgctgatc 438
Query: 1187 actttgttgttgcttgccatgattgggctcctgcagaaac 1226
| ||| | |||||||||||||||||||| ||| |||||||
Sbjct: 439 attttctggttgcttgccatgattgggcccctacagaaac 478