Miyakogusa Predicted Gene
- Lj1g3v2066520.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj1g3v2066520.1 Non Chatacterized Hit- tr|B9RRX7|B9RRX7_RICCO
9-cis-epoxycarotenoid dioxygenase, putative
OS=Ricinus,61.96,0,9-CIS-EPOXYCAROTENOID DIOXYGENASE,NULL;
BETA-CAROTENE DIOXYGENASE,Carotenoid oxygenase;
RPE65,Carote,NODE_44337_length_1903_cov_19.430372.path1.1
(1737 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC60597 similar to UniRef100_A7P585 Cluster: Chromosome... 620 e-177
gnl|LJGI|TC64580 similar to UniRef100_A7P583 Cluster: Chromosome... 571 e-162
gnl|LJGI|BP084864 similar to UniRef100_A7P583 Cluster: Chromosom... 563 e-159
>gnl|LJGI|TC60597 similar to UniRef100_A7P585 Cluster: Chromosome chr4 scaffold_6,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr4 scaffold_6, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (31%)
Length = 778
Score = 620 bits (313), Expect = e-177
Identities = 551/630 (87%), Gaps = 9/630 (1%)
Strand = Plus / Plus
Query: 78 ctctgctttcaagccaatgatcatgagagctgtgtctcaagtccccttgcaaatcaatga 137
|||||||||||||||||||||||||| |||| || || ||||| ||||||||| |||
Sbjct: 145 ctctgctttcaagccaatgatcatgaaagctatgcctgaagtcttcttgcaaattgatgt 204
Query: 138 tgt------tatgaaaagcactgcggttaaattagttgatgcttttgtggattcattctt 191
| |||||||| || ||||| |||||||||||||||||||||||||||||||||
Sbjct: 205 tccaaaaactatgaaaaacagtgcggctaaattagttgatgcttttgtggattcattctt 264
Query: 192 tgaattcattgacaagccattgcttgttccatctcagagtaactttgctccggtggagga 251
|||||||||||||||||| |||||| |||||||||||||||| |||||||||||||||
Sbjct: 265 tgaattcattgacaagcctttgctt---ccatctcagagtaactatgctccggtggagga 321
Query: 252 gttggaggaagccatacttataaccaccattcaaggacaaataccagatggtttcccaca 311
|||||||||||||||| |||| | || ||| |||||||| || ||||||||||| || |
Sbjct: 322 gttggaggaagccatagttatgagcagcatccaaggacacattccagatggttttcccga 381
Query: 312 gggtgtttacatcagaaatggatcaaatcctctctttggaggcctgaaatcaacaaattc 371
|||||| ||||| |||||||| ||||||| || |||||||| |||||||||||||||||
Sbjct: 382 gggtgtatacattagaaatggcccaaatccactatttggaggactgaaatcaacaaattc 441
Query: 372 tatctttgggaggtcaagtcacatttgggtggaaggggagggaatgcttcatgccttgta 431
| | |||||||||||||||||||||||||||||||| || ||||||||||||||||||||
Sbjct: 442 tgtttttgggaggtcaagtcacatttgggtggaaggagaaggaatgcttcatgccttgta 501
Query: 432 ttttaaaaactcaagtcatggggattggactgtcatctacaacaacaagcatgttgagac 491
|||||| || |||||||||||| ||||||||||| |||||||||||||||||||||||||
Sbjct: 502 ttttaagaaatcaagtcatgggaattggactgtcctctacaacaacaagcatgttgagac 561
Query: 492 cgaaacttacaaccttgaaaaacaaaggaacaaaccattgtttctaccggccgtaaaagg 551
||||| ||||| |||||||||||||| |||||||||| |||||| || || | ||||
Sbjct: 562 agaaacatacaagcttgaaaaacaaagaaacaaaccatcgtttcttccagcaattgaagg 621
Query: 552 cgattcgctagtcattttgttttcttatctgctaaactggatgcgatttggagaagtaaa 611
|||||||| || |||||| || | ||||| ||||| ||| |||||||||| ||| |||
Sbjct: 622 cgattcgccagccattttattcgcctatctcctaaattggttgcgatttggcaaagcaaa 681
Query: 612 caaatacatgagcaacaccaatgtctttgagcattcagggaagttttactcagttgctga 671
||||||||| |||||||| ||| || ||||||||||||||||||||||||| ||||||||
Sbjct: 682 caaatacattagcaacacaaatatcattgagcattcagggaagttttactctgttgctga 741
Query: 672 aagtcacattccacaagagattgatatctt 701
||||||||| ||||||||||||||||||||
Sbjct: 742 aagtcacatcccacaagagattgatatctt 771
Score = 105 bits (53), Expect = 9e-22
Identities = 71/77 (92%)
Strand = Plus / Plus
Query: 1 atggccatttcatataataatgcatttatggtaaattgctccattcacaaaagacccttg 60
||||||||||||||||||||||||||| | || |||||||||||||||||||||||| ||
Sbjct: 41 atggccatttcatataataatgcatttctagtgaattgctccattcacaaaagacccctg 100
Query: 61 catgtctcagacaataa 77
|||||||| |||||||
Sbjct: 101 tatgtctcaaacaataa 117
>gnl|LJGI|TC64580 similar to UniRef100_A7P583 Cluster: Chromosome chr4 scaffold_6,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr4 scaffold_6, whole genome shotgun sequence
- Vitis vinifera (Grape), partial (27%)
Length = 831
Score = 571 bits (288), Expect = e-162
Identities = 465/524 (88%)
Strand = Plus / Plus
Query: 1202 ttgattggttttcccgttgttatgaatggagattgaatatgcaaactggggagataaagg 1261
|||| ||||| || ||||||||||||||||||||||||||||||||||||||| | ||||
Sbjct: 5 ttgagtggttatctcgttgttatgaatggagattgaatatgcaaactggggaggttaagg 64
Query: 1262 agaaatatctctgtaaatcaaatatagtgtatatggattttcctatgatcaatgaaaact 1321
||||| |||| ||| | ||| | ||| |||||||||||||||||||||||||||||||
Sbjct: 65 agaaagatctttgtggaacaacaaaagtttatatggattttcctatgatcaatgaaaact 124
Query: 1322 tcataggtgttaagaatagatatgcatacacacaagtagttgatcctgctgcaagcacta 1381
|||||||| ||||||||||||||||||||||||||||||||||||| | |||| ||||
Sbjct: 125 tcataggtattaagaatagatatgcatacacacaagtagttgatccctcatcaagtacta 184
Query: 1382 ctcaagtcgggccaaaatatggaggtttagcaaagctctactttgaagaatcatgtgaag 1441
||| || | |||||||||||||||||||||||||||||||||| ||||||||||| |
Sbjct: 185 ctcgagatgcaccaaaatatggaggtttagcaaagctctactttggagaatcatgtgcaa 244
Query: 1442 agttctctatgatagacaaagagaaacctgaagaaccaataaaggtggaataccacatgt 1501
||||||| | || |||| | || ||||||||||||||||||| || |||||||||||||
Sbjct: 245 agttctcaacgagggacacaaagcaacctgaagaaccaataaaagttgaataccacatgt 304
Query: 1502 ttgagaagaatgtattttgtactggagcatcatttgtgccaaaaaatgagggtgttgaag 1561
||||||||||||||||||||| ||| ||| |||||||||| ||| ||| |||||||||||
Sbjct: 305 ttgagaagaatgtattttgtagtggggcagcatttgtgcctaaagatgggggtgttgaag 364
Query: 1562 aagatgatggttgggtcatcacttttgttcacaatgaagatactaacacatctcaatttc 1621
||||||||||||||||||||||||||||||||||||||||||| ||||||||| || |||
Sbjct: 365 aagatgatggttgggtcatcacttttgttcacaatgaagataccaacacatctgaagttc 424
Query: 1622 atataattgacacaaagaagttttctggtgagacagttgtcaaaatcacttttcctcaca 1681
| |||||||||| |||||||||||| ||||| |||| | ||||||||| || ||| |
Sbjct: 425 gtgtaattgacacgaagaagttttctagtgagccagtcgccaaaatcacattgccttgta 484
Query: 1682 gagttccatatgggtttcatggagctttcatgccaatctcattc 1725
|||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 485 gagttccatatgggtttcatggagctttcatgtcaatctcattc 528
>gnl|LJGI|BP084864 similar to UniRef100_A7P583 Cluster: Chromosome chr4 scaffold_6,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr4 scaffold_6, whole genome shotgun sequence
- Vitis vinifera (Grape), partial (17%)
Length = 502
Score = 563 bits (284), Expect = e-159
Identities = 378/408 (92%), Gaps = 1/408 (0%)
Strand = Plus / Minus
Query: 1321 ttcataggtgttaagaatagatatgcatacacacaagtagttgatcctgctgcaagcact 1380
||||||||| ||||||||||||||||||||||||| |||||||||| ||||||||| |||
Sbjct: 499 ttcataggtattaagaatagatatgcatacacacaggtagttgatcatgctgcaagtact 440
Query: 1381 actcaagtcgggccaaaatatggaggtttagcaaagctctactttgaagaatcatgtgaa 1440
|||| || | ||||||||||||||||||| || ||||||||||||||||||||| ||| |
Sbjct: 439 actcgagaccggccaaaatatggaggtttggcgaagctctactttgaagaatcacgtgca 380
Query: 1441 gagttctctatgatagacaaagagaaacctgaagaaccaataaaggtggaataccacatg 1500
|| || |||||| |||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 379 aaggtccctatgagagacaaagagtaacctgaagaaccaataaaggtggaataccacatg 320
Query: 1501 tttgagaagaatgtattttgtactggagcatcatttgtgccaaaaaatgagggtgttgaa 1560
| |||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 319 tatgagaagaataaattttgtactggagcatcatttgtgccaaaagatgagggtgttgaa 260
Query: 1561 gaagatgatggttgggtcatcacttttgttcacaatgaagatactaacacatctcaattt 1620
|||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||
Sbjct: 259 gaagatgatggttgggtcatcacttttgttcacaatgaagatactaacacatctgaagtt 200
Query: 1621 catataattgacacaaagaagttttctggtgagacagttgtcaaaatcacttttcctcac 1680
|||||||||||||||||||| |||||||||||||| ||||| |||||||| || |||| |
Sbjct: 199 catataattgacacaaagaaattttctggtgagacggttgtaaaaatcacattgcctcgc 140
Query: 1681 agagttccatatgggtttcatggagctttcatgccaatctcattccag 1728
||||||||||||||||||||||||||||| ||| ||||||||||||||
Sbjct: 139 agagttccatatgggtttcatggagcttt-atgtcaatctcattccag 93