Miyakogusa Predicted Gene
- Lj1g3v2065490.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj1g3v2065490.1 Non Chatacterized Hit- tr|I1K9D1|I1K9D1_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,63.73,0,RING FINGER
PROTEIN 6/12/38,NULL; RING/U-box,NULL; Ring finger,Zinc finger,
RING-type; ZF_RING_2,Zin,CUFF.28381.1
(1152 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC63865 weakly similar to UniRef100_A7PEJ8 Cluster: Chr... 1497 0.0
gnl|LJGI|BP057252 similar to UniRef100_A2RIU6 Cluster: Prohibiti... 66 5e-10
gnl|LJGI|TC67662 similar to UniRef100_UPI0000660152 Cluster: Int... 58 1e-07
>gnl|LJGI|TC63865 weakly similar to UniRef100_A7PEJ8 Cluster: Chromosome chr11
scaffold_13, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr11 scaffold_13, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (20%)
Length = 826
Score = 1497 bits (755), Expect = 0.0
Identities = 758/759 (99%)
Strand = Plus / Plus
Query: 394 atcgaggttttaaggttgttgccaaagtgcaaacatgctttccacttgagttgcattgac 453
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 atcgaggttttaaggttgttgccaaagtgcaaacatgctttccacttgagttgcattgac 60
Query: 454 aagtggctagaaagccactctacttgccctctttgcaggtacagagttgaagcaggggac 513
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 aagtggctagaaagccactctacttgccctctttgcaggtacagagttgaagcaggggac 120
Query: 514 atcaagaacttctcttattcattgagttcaaggtctgtgagagttccttcaaatttaact 573
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 atcaagaacttctcttattcattgagttcaaggtctgtgagagttccttcaaatttaact 180
Query: 574 gaggacccaaatcttgaaatttttatccaaagagagtcatcaaggagaaagagcaacaat 633
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 gaggacccaaatcttgaaatttttatccaaagagagtcatcaaggagaaagagcaacaat 240
Query: 634 caagagcttcttattgatcacgatggtggaggtaatagtggtggttcaactgcaaagttc 693
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 caagagcttcttattgatcacgatggtggaggtaatagtggtggttcaactgcaaagttc 300
Query: 694 aaacctttgcacttgatcaatcatagaattttgatctctgatgttgttacaaggagcagg 753
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 aaacctttgcacttgatcaatcatagaattttgatctctgatgttgttacaaggagcagg 360
Query: 754 tggagtgatcttaattcctcagatttgctatcattgaactctgagatgcttaatgacatg 813
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 tggagtgatcttaattcctcagatttgctatcattgaactctgagatgcttaatgacatg 420
Query: 814 tgtagcactagattttctccttctgaatccaacaacagtgagaagtttcaaggagtttca 873
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 tgtagcactagattttctccttctgaatccaacaacagtgagaagtttcaaggagtttca 480
Query: 874 atccattttcccagtgcttccaatgaggaagaagatgagaattcgttcacggcgctgaat 933
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 atccattttcccagtgcttccaatgaggaagaagatgagaattcgttcacggcgctgaat 540
Query: 934 ccggctgagaagaggtccatgtctgagattgcgaatgttccaaggttttctgagatgagc 993
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 ccagctgagaagaggtccatgtctgagattgcgaatgttccaaggttttctgagatgagc 600
Query: 994 aagaggaacagaatcagagaatgtaatggggagaatggaagtgaagagagacttttgagg 1053
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 aagaggaacagaatcagagaatgtaatggggagaatggaagtgaagagagacttttgagg 660
Query: 1054 atttggatgccaattgcaagaagaacagtccaattgtttgcaagacaagaaagaaattta 1113
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 atttggatgccaattgcaagaagaacagtccaattgtttgcaagacaagaaagaaattta 720
Query: 1114 gttgagttagaagatagacctttagcttcaaatgtttga 1152
|||||||||||||||||||||||||||||||||||||||
Sbjct: 721 gttgagttagaagatagacctttagcttcaaatgtttga 759
>gnl|LJGI|BP057252 similar to UniRef100_A2RIU6 Cluster: Prohibitin/stomatin like
protein; n=2; Lactococcus lactis subsp. cremoris|Rep:
Prohibitin/, partial (4%)
Length = 402
Score = 65.9 bits (33), Expect = 5e-10
Identities = 60/69 (86%)
Strand = Plus / Minus
Query: 1084 caattgtttgcaagacaagaaagaaatttagttgagttagaagatagacctttagcttca 1143
||||||||||||||||||||| |||| | |||| |||||| | | |||||||||||||
Sbjct: 338 caattgtttgcaagacaagaagaaaatgcacttgatttagaacacaaacctttagcttca 279
Query: 1144 aatgtttga 1152
|||||||||
Sbjct: 278 aatgtttga 270
>gnl|LJGI|TC67662 similar to UniRef100_UPI0000660152 Cluster: Intraflagellar transport
74 homolog (Coiled-coil domain-containing protein 2)
(Capillary morphogenesis protein 1) (CMG-1).; n=1;
Takifugu rubripes|Rep: Intraflagellar transport 74
homolog (Coiled-coil domain-containing protein 2)
(Capillary morphogenesis protein 1) (CMG-1). - Takifugu
rubripes, partial (5%)
Length = 801
Score = 58.0 bits (29), Expect = 1e-07
Identities = 59/69 (85%)
Strand = Plus / Plus
Query: 1084 caattgtttgcaagacaagaaagaaatttagttgagttagaagatagacctttagcttca 1143
||||||||||||||||||||| |||| | |||| |||||| | | | |||||||||||
Sbjct: 532 caattgtttgcaagacaagaagaaaatgcacttgatttagaacacaaagctttagcttca 591
Query: 1144 aatgtttga 1152
|||||||||
Sbjct: 592 aatgtttga 600