Miyakogusa Predicted Gene

Lj1g3v2063290.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj1g3v2063290.1 tr|C1E5F9|C1E5F9_MICSR Predicted protein
OS=Micromonas sp. (strain RCC299 / NOUM17) GN=MICPUN_81588
,54.02,1e-18,seg,NULL; SUBFAMILY NOT NAMED,NULL; UNCHARACTERIZED,ER
membrane protein complex subunit 1; DUF1620,D,CUFF.28365.1
         (298 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC64862 similar to UniRef100_A7P5A0 Cluster: Chromosome...   525   e-149

>gnl|LJGI|TC64862 similar to UniRef100_A7P5A0 Cluster: Chromosome chr4 scaffold_6,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr4 scaffold_6, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (16%)
          Length = 647

 Score =  525 bits (265), Expect = e-149
 Identities = 265/265 (100%)
 Strand = Plus / Plus

                                                                       
Query: 34  cagtcctacatcacacattccctaaaagtggaaggtctccgaggtatagtaacagtgcct 93
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 199 cagtcctacatcacacattccctaaaagtggaaggtctccgaggtatagtaacagtgcct 258

                                                                       
Query: 94  gccaaactggagtctacatcacttgtctttgcctatggagtagatctattttttacccag 153
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 259 gccaaactggagtctacatcacttgtctttgcctatggagtagatctattttttacccag 318

                                                                       
Query: 154 attgctccttctaggacttacgattcactaacagaagatttcagctatgctctactacta 213
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 319 attgctccttctaggacttacgattcactaacagaagatttcagctatgctctactacta 378

                                                                       
Query: 214 ctaacaatcgtagcacttgtagcagcaatatttgccacttgggtattatccgagaggaaa 273
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 379 ctaacaatcgtagcacttgtagcagcaatatttgccacttgggtattatccgagaggaaa 438

                                    
Query: 274 gatctagaagaaaaatggagatgat 298
           |||||||||||||||||||||||||
Sbjct: 439 gatctagaagaaaaatggagatgat 463