Miyakogusa Predicted Gene

Lj1g3v2063230.2
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj1g3v2063230.2 tr|D8UER5|D8UER5_VOLCA TSO1-like protein
OS=Volvox carteri GN=VOLCADRAFT_119604 PE=4
SV=1,68.57,0.000004,CXC,CRC domain; TESMIN/TSO1-RELATED,NULL;
seg,NULL; CRC,CRC domain,CUFF.28356.2
         (1128 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC63730 similar to UniRef100_A7PEM5 Cluster: Chromosome...   103   2e-21

>gnl|LJGI|TC63730 similar to UniRef100_A7PEM5 Cluster: Chromosome chr11 scaffold_13,
            whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
            Chromosome chr11 scaffold_13, whole genome shotgun
            sequence - Vitis vinifera (Grape), partial (39%)
          Length = 1268

 Score =  103 bits (52), Expect = 2e-21
 Identities = 76/84 (90%)
 Strand = Plus / Plus

                                                                        
Query: 706  aagaagtattgtgagtgcttccaagccaatatcctctgctctgaaaattgtaaatgcatg 765
            |||||||| ||||| ||||||||||||||| | || ||||||||||||||||||||||||
Sbjct: 1020 aagaagtactgtgaatgcttccaagccaatgttctttgctctgaaaattgtaaatgcatg 1079

                                    
Query: 766  gattgcaagaattctgaaggaagt 789
            || |||||||||| ||| ||||||
Sbjct: 1080 gactgcaagaattttgagggaagt 1103



 Score = 54.0 bits (27), Expect = 2e-06
 Identities = 66/79 (83%)
 Strand = Plus / Plus

                                                                       
Query: 478 ggaatctactgtgatggctgcaactgtctaaattgtcacaataatgtggataatgaagct 537
           ||||| || ||||| || ||||||||| ||||||||  ||| ||||| || |||||||||
Sbjct: 792 ggaatatattgtgagggttgcaactgtgtaaattgtttcaacaatgttgaaaatgaagct 851

                              
Query: 538 gccagacaggaggctgttg 556
           || |||| ||| |||||||
Sbjct: 852 gctagacgggaagctgttg 870