Miyakogusa Predicted Gene

Lj1g3v2050890.2
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj1g3v2050890.2 Non Chatacterized Hit- tr|D8RJ77|D8RJ77_SELML
Putative uncharacterized protein MYB3R1
OS=Selaginella,53.68,3e-17,coiled-coil,NULL; seg,NULL,CUFF.28611.2
         (1494 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC72824 similar to UniRef100_Q948S5 Cluster: Myb; n=1; ...   670   0.0  

>gnl|LJGI|TC72824 similar to UniRef100_Q948S5 Cluster: Myb; n=1; Nicotiana tabacum|Rep:
            Myb - Nicotiana tabacum (Common tobacco), partial (7%)
          Length = 561

 Score =  670 bits (338), Expect = 0.0
 Identities = 353/358 (98%)
 Strand = Plus / Plus

                                                                        
Query: 1137 tagccccaggcctggcactgaacttacgattgaggattttgggtatttgttgagcccagg 1196
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1    tagccccaggcctggcactgaacttacgattgaggattttgggtatttgttgagcccagg 60

                                                                        
Query: 1197 tgatagaagctacgatgcaatcggactgatgaaacaggtcagtgaacaaaccgcagttca 1256
            ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 61   tgatagaagctacgatgcaatcggactgatgaaacaggtcagtgaaccaaccgcagttca 120

                                                                        
Query: 1257 atatgccaatgctcatgagattttggaaaaccaaactcataaggcgttgttaccaagaga 1316
            |||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||
Sbjct: 121  atatgccaatgctcatgagattttggaaaacccaactcataaggcgttgttacccagaga 180

                                                                        
Query: 1317 tgcatctggaaatgaccgggatgaggaacaggaaaacaatgatcctaataatcagcctgt 1376
            ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 181  tgcatctggaaatgaccgggatgaggaacaggaaaaccatgatcctaataatcagcctgt 240

                                                                        
Query: 1377 ggagcgtcgcatacttgacttcagcgaatgtgaaactccgggcgatgataagagcaaatc 1436
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 241  ggagcgtcgcatacttgacttcagcgaatgtgaaactccgggcgatgataagagccaatc 300

                                                                      
Query: 1437 ctcaggtgtgacattctctagcccttcttcgtatttgttgaagggttgtagataaata 1494
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301  ctcaggtgtgacattctctagcccttcttcgtatttgttgaagggttgtagataaata 358