Miyakogusa Predicted Gene
- Lj1g3v2050880.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj1g3v2050880.1 Non Chatacterized Hit- tr|K0KNU6|K0KNU6_9ASCO
Uncharacterized protein OS=Wickerhamomyces ciferrii
PE,39.89,2e-18,Domain in the RNA-binding Lupus La protein;,RNA-binding
protein Lupus La; RNA recognition motif,RNA ,CUFF.28610.1
(1362 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC57686 similar to UniRef100_A7P5B6 Cluster: Chromosome... 2692 0.0
gnl|LJGI|TC67491 similar to UniRef100_A7P5B6 Cluster: Chromosome... 272 5e-72
gnl|LJGI|TC71239 similar to UniRef100_A7KF65 Cluster: ATP syntha... 88 2e-16
>gnl|LJGI|TC57686 similar to UniRef100_A7P5B6 Cluster: Chromosome chr4 scaffold_6,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr4 scaffold_6, whole genome shotgun sequence
- Vitis vinifera (Grape), partial (72%)
Length = 1605
Score = 2692 bits (1358), Expect = 0.0
Identities = 1361/1362 (99%)
Strand = Plus / Plus
Query: 1 atggcgacgccgaccacgttgaacgaagaaacaaccaagaaagtgatacgacaagtggag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 68 atggcgacgccgaccacgttgaacgaagaaacaaccaagaaagtgatacgacaagtggag 127
Query: 61 ttctacttcagtgatagcaaccttcccaaggacaattttatgcggaaaaccgtctctgaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 128 ttctacttcagtgatagcaaccttcccaaggacaattttatgcggaaaaccgtctctgaa 187
Query: 121 agcgaagatggcatggttagtttggctttgctttgttctttcaaccgaatgcgccagcac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 188 agcgaagatggcatggttagtttggctttgctttgttctttcaaccgaatgcgccagcac 247
Query: 181 cttaatttgggtgatgtaaaggctgaggatgtgactgaagatactgttaaggctgttgct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 248 cttaatttgggtgatgtaaaggctgaggatgtgactgaagatactgttaaggctgttgct 307
Query: 241 catgttttgagaaattctgcttcactcaaagtctctgaagatgggaaaaaagttggcagg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 308 catgttttgagaaattctgcttcactcaaagtctctgaagatgggaaaaaagttggcagg 367
Query: 301 acaactgaacttccaaagaccgaagaggtcattgagcaggtggatataagaacaattgct 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 368 acaactgaacttccaaagaccgaagaggtcattgagcaggtggatataagaacaattgct 427
Query: 361 gcatcaccatttcaatatgatctgaagcttgaagatgtggagacattcttcagtcaatat 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 428 gcatcaccatttcaatatgatctgaagcttgaagatgtggagacattcttcagtcaatat 487
Query: 421 gctaaggtcaacagtgtgcgtcttccccgtcatgttggggacaaaaagttcttctgtggc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 488 gctaaggtcaacagtgtgcgtcttccccgtcatgttggggacaaaaagttcttctgtggc 547
Query: 481 actgccctgattgaattctcttcagaggaagaagtagaaaaagttctcaaggaaaaattg 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 548 actgccctgattgaattctcttcagaggaagaagtagaaaaagttctcaaggaaaaattg 607
Query: 541 gtctatgctggggctgagttagaattgaaaccaaagaaggactttgatgcagagagacaa 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 608 gtctatgctggggctgagttagaattgaaaccaaagaaggactttgatgcagagagacaa 667
Query: 601 aaggagttagaagaatatgaaaaatctcatccatctactggttcaaatcatcagaataac 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 668 aaggagttagaagaatatgaaaaatctcatccatctactggttcaaatcatcagaataac 727
Query: 661 tcagatgcagatgaatactacccaaaaggcttaattattgccttcaaactaaagagcatt 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 728 tcagatgcagatgaatactacccaaaaggcttaattattgccttcaaactaaagagcatt 787
Query: 721 tctgatgaagttccttcagaacaaaatggtgttgatcagcaagccaatgacaatgctgtt 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 788 tctgatgaagttccttcagaacaaaatggtgttgatcagcaagccaatgacaatgctgtt 847
Query: 781 gtttctaaaactgatgaaaaaattccatctgaaattacttctgagaaaaatgacgaaaag 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 848 gtttctaaaactgatgaaaaaattccatctgaaattacttctgagaaaaatgacgaaaag 907
Query: 841 gtttcagaaaatgttgacaacgatgaagaaaataatgagataaaagatggaaagaaaact 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 908 gtttcagaaaatgttgacaacgatgaagaaaataatgagataaaagatggaaagaaaact 967
Query: 901 caagatgaagagaagaatcccaaagctgatgaaaagctttcagctgctgcttgcaaggat 960
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 968 caagatgaagagaagaatcccaaagctgatgaaaagctttcagctgctgcttgcaaggat 1027
Query: 961 aacatggatgttgtcttgcgtgaggatttgaagcgtgtgtttgagaagtttggtgcagtg 1020
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1028 aacatggatgttgtcttgcgtgaggatttgaagcgtgtgtttgagaagtttggtgcagtg 1087
Query: 1021 aagtacattgatttcacgatgggagcagactcaggattcattcgatttgaagaaagtgaa 1080
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1088 aagtacattgatttcacgatgggagcagactcaggattcattcgatttgaagaaagtgaa 1147
Query: 1081 gcggctcaaaaatctcgtgctgctgctgttctttcagagaagggaggcttggttgtaaag 1140
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 1148 gcggctcaaaaatctcgtgctgctgcagttctttcagagaagggaggcttggttgtaaag 1207
Query: 1141 aattatattgctatgctagatccagtgactggtgaggctgaaaaagaatactggtccctg 1200
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1208 aattatattgctatgctagatccagtgactggtgaggctgaaaaagaatactggtccctg 1267
Query: 1201 cttcgtggtaatcaagacaagcgtcgagataattttaagggtaaccgaggaaggggaggt 1260
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1268 cttcgtggtaatcaagacaagcgtcgagataattttaagggtaaccgaggaaggggaggt 1327
Query: 1261 aggcatggtagagggggagggagacactcacgctcaagagaaaatgactctgcagcaggt 1320
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1328 aggcatggtagagggggagggagacactcacgctcaagagaaaatgactctgcagcaggt 1387
Query: 1321 cgtccaaataaagttcagaaagttggtacagcggcataatgg 1362
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1388 cgtccaaataaagttcagaaagttggtacagcggcataatgg 1429
>gnl|LJGI|TC67491 similar to UniRef100_A7P5B6 Cluster: Chromosome chr4 scaffold_6,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr4 scaffold_6, whole genome shotgun sequence
- Vitis vinifera (Grape), partial (11%)
Length = 678
Score = 272 bits (137), Expect = 5e-72
Identities = 161/169 (95%)
Strand = Plus / Plus
Query: 1025 acattgatttcacgatgggagcagactcaggattcattcgatttgaagaaagtgaagcgg 1084
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 342 acattgatttcacgatgggagcagaatcaggattcattcgatttgaagaaagtgaagcgg 401
Query: 1085 ctcaaaaatctcgtgctgctgctgttctttcagagaagggaggcttggttgtaaagaatt 1144
|||||| ||||||||||||||||||| |||||||||| || ||||||||||| |||||||
Sbjct: 402 ctcaaacatctcgtgctgctgctgttatttcagagaatgggggcttggttgtgaagaatt 461
Query: 1145 atattgctatgctagatccagtgactggtgaggctgaaaaagaatactg 1193
| |||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 462 acattgttatgctagatccagtgactggtgaggctgaaaaagaatactg 510
>gnl|LJGI|TC71239 similar to UniRef100_A7KF65 Cluster: ATP synthase F0 subunit 6; n=1;
Leucosarcia melanoleuca|Rep: ATP synthase F0 subunit 6 -
Leucosarcia melanoleuca (wonga pigeon), partial (9%)
Length = 727
Score = 87.7 bits (44), Expect = 2e-16
Identities = 47/48 (97%)
Strand = Plus / Plus
Query: 1031 atttcacgatgggagcagactcaggattcattcgatttgaagaaagtg 1078
||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 379 atttcacgatgggagcagaatcaggattcattcgatttgaagaaagtg 426