Miyakogusa Predicted Gene
- Lj1g3v2038800.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj1g3v2038800.1 tr|Q54TG6|Q54TG6_DICDI Lupus La protein
OS=Dictyostelium discoideum GN=DDB_0204655 PE=4
SV=1,34.48,4e-19,RNA-BINDING PROTEIN-RELATED,NULL; LUPUS LA
PROTEIN-RELATED,NULL; "Winged helix" DNA-binding domain,N,CUFF.28606.1
(677 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC57686 similar to UniRef100_A7P5B6 Cluster: Chromosome... 1342 0.0
>gnl|LJGI|TC57686 similar to UniRef100_A7P5B6 Cluster: Chromosome chr4 scaffold_6,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr4 scaffold_6, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (72%)
Length = 1605
Score = 1342 bits (677), Expect = 0.0
Identities = 677/677 (100%)
Strand = Plus / Plus
Query: 1 atggcgacgccgaccacgttgaacgaagaaacaaccaagaaagtgatacgacaagtggag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 68 atggcgacgccgaccacgttgaacgaagaaacaaccaagaaagtgatacgacaagtggag 127
Query: 61 ttctacttcagtgatagcaaccttcccaaggacaattttatgcggaaaaccgtctctgaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 128 ttctacttcagtgatagcaaccttcccaaggacaattttatgcggaaaaccgtctctgaa 187
Query: 121 agcgaagatggcatggttagtttggctttgctttgttctttcaaccgaatgcgccagcac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 188 agcgaagatggcatggttagtttggctttgctttgttctttcaaccgaatgcgccagcac 247
Query: 181 cttaatttgggtgatgtaaaggctgaggatgtgactgaagatactgttaaggctgttgct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 248 cttaatttgggtgatgtaaaggctgaggatgtgactgaagatactgttaaggctgttgct 307
Query: 241 catgttttgagaaattctgcttcactcaaagtctctgaagatgggaaaaaagttggcagg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 308 catgttttgagaaattctgcttcactcaaagtctctgaagatgggaaaaaagttggcagg 367
Query: 301 acaactgaacttccaaagaccgaagaggtcattgagcaggtggatataagaacaattgct 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 368 acaactgaacttccaaagaccgaagaggtcattgagcaggtggatataagaacaattgct 427
Query: 361 gcatcaccatttcaatatgatctgaagcttgaagatgtggagacattcttcagtcaatat 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 428 gcatcaccatttcaatatgatctgaagcttgaagatgtggagacattcttcagtcaatat 487
Query: 421 gctaaggtcaacagtgtgcgtcttccccgtcatgttggggacaaaaagttcttctgtggc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 488 gctaaggtcaacagtgtgcgtcttccccgtcatgttggggacaaaaagttcttctgtggc 547
Query: 481 actgccctgattgaattctcttcagaggaagaagtagaaaaagttctcaaggaaaaattg 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 548 actgccctgattgaattctcttcagaggaagaagtagaaaaagttctcaaggaaaaattg 607
Query: 541 gtctatgctggggctgagttagaattgaaaccaaagaaggactttgatgcagagagacaa 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 608 gtctatgctggggctgagttagaattgaaaccaaagaaggactttgatgcagagagacaa 667
Query: 601 aaggagttagaagaatatgaaaaatctcatccatctactggttcaaatcatcagaataac 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 668 aaggagttagaagaatatgaaaaatctcatccatctactggttcaaatcatcagaataac 727
Query: 661 tcagatgcagatgaata 677
|||||||||||||||||
Sbjct: 728 tcagatgcagatgaata 744