Miyakogusa Predicted Gene

Lj1g3v2038790.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj1g3v2038790.1 tr|G7ZWL9|G7ZWL9_MEDTR C-myb-like transcription
factor OS=Medicago truncatula GN=MTR_042s0013 PE=4
S,76.56,2e-18,Myb_DNA-binding,SANT/Myb domain; no
description,Homeodomain-like; HTH_MYB,Myb domain;
Homeodomain-li,CUFF.28605.1
         (207 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|DC592860 similar to UniRef100_Q948S5 Cluster: Myb; n=1;...   319   4e-87

>gnl|LJGI|DC592860 similar to UniRef100_Q948S5 Cluster: Myb; n=1; Nicotiana
           tabacum|Rep: Myb - Nicotiana tabacum (Common tobacco),
           partial (8%)
          Length = 576

 Score =  319 bits (161), Expect = 4e-87
 Identities = 175/180 (97%)
 Strand = Plus / Plus

                                                                       
Query: 1   atggaaggtgaaaggttaacccctgctccatcggagggaaccgtggacggtgttcagaaa 60
           |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 309 atggaaggtgaaaggtcaacccctgctccatcggagggaaccgtggacggtgttcagaaa 368

                                                                       
Query: 61  attagagcgctgcatgggaggactactgggccaacaagacggtctactaaaggacaatgg 120
           |||||||| ||  |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 369 attagagctctatatgggaggactactgggccaacaagacggtctactaaaggacaatgg 428

                                                                       
Query: 121 actcctgaggaggatgagattttgcggaatgctgttcatcgttttaaagggaagaattgg 180
           |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 429 actcctgaggaggatgagattttgcggaatgctgttcatcgttttanagggaagaattgg 488