Miyakogusa Predicted Gene
- Lj1g3v2036760.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj1g3v2036760.1 Non Chatacterized Hit- tr|I1JUR6|I1JUR6_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.38858 PE,84.41,0,P-loop
containing nucleoside triphosphate hydrolases,NULL;
GTPase_EngB,GTP-binding protein, ribosome,CUFF.28339.1
(882 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|DC596420 similar to UniRef100_A7P5C5 Cluster: Chromosom... 731 0.0
gnl|LJGI|AV771221 similar to UniRef100_A7P5C5 Cluster: Chromosom... 329 2e-89
gnl|LJGI|AV428881 weakly similar to UniRef100_A7Q9Q0 Cluster: Ch... 109 3e-23
gnl|LJGI|FS322848 similar to UniRef100_A7Q9Q0 Cluster: Chromosom... 94 2e-18
gnl|LJGI|FS336312 weakly similar to UniRef100_A7Q9Q0 Cluster: Ch... 94 2e-18
gnl|LJGI|FS319657 similar to UniRef100_A7Q9Q0 Cluster: Chromosom... 94 2e-18
gnl|LJGI|TC58891 similar to UniRef100_A7Q9Q9 Cluster: Chromosome... 94 2e-18
gnl|LJGI|FS338367 similar to UniRef100_A7Q9Q0 Cluster: Chromosom... 56 4e-07
gnl|LJGI|FS344553 similar to UniRef100_A7Q9Q0 Cluster: Chromosom... 56 4e-07
>gnl|LJGI|DC596420 similar to UniRef100_A7P5C5 Cluster: Chromosome chr4 scaffold_6,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr4 scaffold_6, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (38%)
Length = 558
Score = 731 bits (369), Expect = 0.0
Identities = 369/369 (100%)
Strand = Plus / Plus
Query: 156 cgacaaactcttcatcccgccggagacaaaactccctctcgacgccgccgccgccagaat 215
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 190 cgacaaactcttcatcccgccggagacaaaactccctctcgacgccgccgccgccagaat 249
Query: 216 tctcaacggctccaacatcctcctcagcgactacgcctccgacgctcaggtcctgcaagc 275
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 250 tctcaacggctccaacatcctcctcagcgactacgcctccgacgctcaggtcctgcaagc 309
Query: 276 cgacttcgtcaaaagcagcgtcgaaaccgacgcttgcccctccgatggcctccctgagtt 335
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 310 cgacttcgtcaaaagcagcgtcgaaaccgacgcttgcccctccgatggcctccctgagtt 369
Query: 336 cgccctcgttggtcgctccaatgtcggcaaatcctcgctcctcaactctcttgttcgccg 395
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 370 cgccctcgttggtcgctccaatgtcggcaaatcctcgctcctcaactctcttgttcgccg 429
Query: 396 caagaaactcgccttgacttcgaagaaacctgggaagactcaatgcattaaccattttcg 455
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 430 caagaaactcgccttgacttcgaagaaacctgggaagactcaatgcattaaccattttcg 489
Query: 456 gattaataatagctggtacctggttgatttgcctggatatgggtacgcatctgcaccaaa 515
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 490 gattaataatagctggtacctggttgatttgcctggatatgggtacgcatctgcaccaaa 549
Query: 516 ggaacttag 524
|||||||||
Sbjct: 550 ggaacttag 558
Score = 161 bits (81), Expect = 9e-39
Identities = 81/81 (100%)
Strand = Plus / Plus
Query: 1 atggttcttcttcacccctccagattccccttctccttattaaccttatccccatcactc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 35 atggttcttcttcacccctccagattccccttctccttattaaccttatccccatcactc 94
Query: 61 tcactccgaccctattccaaa 81
|||||||||||||||||||||
Sbjct: 95 tcactccgaccctattccaaa 115
>gnl|LJGI|AV771221 similar to UniRef100_A7P5C5 Cluster: Chromosome chr4 scaffold_6,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr4 scaffold_6, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (18%)
Length = 473
Score = 329 bits (166), Expect = 2e-89
Identities = 169/170 (99%)
Strand = Plus / Minus
Query: 713 acggaggcaaaagaccagaagaaaatgtcaatgattttcaggacttgatacgtggcttct 772
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 472 acggaggcaaaagaccagaagtaaatgtcaatgattttcaggacttgatacgtggcttct 413
Query: 773 ttcaaacagtgcctccatggatcatgaccagtagtgtcacccatcagggtcgtgatgaga 832
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 412 ttcaaacagtgcctccatggatcatgaccagtagtgtcacccatcagggtcgtgatgaga 353
Query: 833 tactcctccatatggcccagctacggaattactggctgaagcactagttc 882
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 352 tactcctccatatggcccagctacggaattactggctgaagcactagttc 303
>gnl|LJGI|AV428881 weakly similar to UniRef100_A7Q9Q0 Cluster: Chromosome chr5
scaffold_67, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr5 scaffold_67, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (6%)
Length = 314
Score = 109 bits (55), Expect = 3e-23
Identities = 61/63 (96%)
Strand = Plus / Plus
Query: 201 cgccgccgccagaattctcaacggctccaacatcctcctcagcgactacgcctccgacgc 260
||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 22 cgccgccgccagaatactcaacggctccaacatcctcctcagcgactacgccttcgacgc 81
Query: 261 tca 263
|||
Sbjct: 82 tca 84
>gnl|LJGI|FS322848 similar to UniRef100_A7Q9Q0 Cluster: Chromosome chr5 scaffold_67,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr5 scaffold_67, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (15%)
Length = 788
Score = 93.7 bits (47), Expect = 2e-18
Identities = 56/59 (94%)
Strand = Plus / Plus
Query: 278 acttcgtcaaaagcagcgtcgaaaccgacgcttgcccctccgatggcctccctgagttc 336
|||||||||||||||||||||||||| |||||| |||||||||||||||||| ||||||
Sbjct: 96 acttcgtcaaaagcagcgtcgaaacccacgcttacccctccgatggcctccccgagttc 154
Score = 52.0 bits (26), Expect = 6e-06
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 185 aactccctctcgacgccgccgccgcc 210
||||||||||||||||||||||||||
Sbjct: 56 aactccctctcgacgccgccgccgcc 81
>gnl|LJGI|FS336312 weakly similar to UniRef100_A7Q9Q0 Cluster: Chromosome chr5
scaffold_67, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr5 scaffold_67, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (12%)
Length = 680
Score = 93.7 bits (47), Expect = 2e-18
Identities = 56/59 (94%)
Strand = Plus / Plus
Query: 278 acttcgtcaaaagcagcgtcgaaaccgacgcttgcccctccgatggcctccctgagttc 336
|||||||||||||||||||||||||| |||||| |||||||||||||||||| ||||||
Sbjct: 95 acttcgtcaaaagcagcgtcgaaacccacgcttacccctccgatggcctccccgagttc 153
Score = 52.0 bits (26), Expect = 6e-06
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 185 aactccctctcgacgccgccgccgcc 210
||||||||||||||||||||||||||
Sbjct: 55 aactccctctcgacgccgccgccgcc 80
>gnl|LJGI|FS319657 similar to UniRef100_A7Q9Q0 Cluster: Chromosome chr5 scaffold_67,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr5 scaffold_67, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (15%)
Length = 799
Score = 93.7 bits (47), Expect = 2e-18
Identities = 56/59 (94%)
Strand = Plus / Plus
Query: 278 acttcgtcaaaagcagcgtcgaaaccgacgcttgcccctccgatggcctccctgagttc 336
|||||||||||||||||||||||||| |||||| |||||||||||||||||| ||||||
Sbjct: 100 acttcgtcaaaagcagcgtcgaaacccacgcttacccctccgatggcctccccgagttc 158
Score = 52.0 bits (26), Expect = 6e-06
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 185 aactccctctcgacgccgccgccgcc 210
||||||||||||||||||||||||||
Sbjct: 66 aactccctctcgacgccgccgccgcc 91
>gnl|LJGI|TC58891 similar to UniRef100_A7Q9Q9 Cluster: Chromosome chr5 scaffold_67,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr5 scaffold_67, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (12%)
Length = 825
Score = 93.7 bits (47), Expect = 2e-18
Identities = 56/59 (94%)
Strand = Plus / Plus
Query: 278 acttcgtcaaaagcagcgtcgaaaccgacgcttgcccctccgatggcctccctgagttc 336
|||||||||||||||||||||||||| |||||| |||||||||||||||||| ||||||
Sbjct: 159 acttcgtcaaaagcagcgtcgaaacccacgcttacccctccgatggcctccccgagttc 217
Score = 52.0 bits (26), Expect = 6e-06
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 185 aactccctctcgacgccgccgccgcc 210
||||||||||||||||||||||||||
Sbjct: 119 aactccctctcgacgccgccgccgcc 144
>gnl|LJGI|FS338367 similar to UniRef100_A7Q9Q0 Cluster: Chromosome chr5 scaffold_67,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr5 scaffold_67, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (15%)
Length = 836
Score = 56.0 bits (28), Expect = 4e-07
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 305 acgcttgcccctccgatggcctccctgagttc 336
||||||||||||||||||||||||| ||||||
Sbjct: 104 acgcttgcccctccgatggcctccccgagttc 135
>gnl|LJGI|FS344553 similar to UniRef100_A7Q9Q0 Cluster: Chromosome chr5 scaffold_67,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr5 scaffold_67, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (15%)
Length = 803
Score = 56.0 bits (28), Expect = 4e-07
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 305 acgcttgcccctccgatggcctccctgagttc 336
||||||||||||||||||||||||| ||||||
Sbjct: 107 acgcttgcccctccgatggcctccccgagttc 138