Miyakogusa Predicted Gene
- Lj1g3v2033030.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj1g3v2033030.1 tr|B9NBK7|B9NBK7_POPTR Predicted protein
OS=Populus trichocarpa GN=POPTRDRAFT_935499 PE=4
SV=1,55.67,0,seg,NULL; SUBFAMILY NOT NAMED,NULL; FAMILY NOT
NAMED,NULL; no description,NULL; Protein kinase-like ,CUFF.28274.1
(1767 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|FS319460 weakly similar to UniRef100_A7P197 Cluster: Ch... 577 e-164
gnl|LJGI|FS346352 weakly similar to UniRef100_A7P172 Cluster: Ch... 305 5e-82
gnl|LJGI|TC57130 UniRef100_Q70I30 Cluster: S-receptor kinase-lik... 94 4e-18
gnl|LJGI|NP840531 GB|AJ580824.1|CAE45595.1 S-receptor kinase-lik... 70 5e-11
gnl|LJGI|TC81772 UniRef100_Q70I29 Cluster: S-receptor kinase-lik... 70 5e-11
gnl|LJGI|TC57128 UniRef100_Q70I28 Cluster: S-receptor kinase-lik... 66 8e-10
gnl|LJGI|TC81649 UniRef100_Q70I29 Cluster: S-receptor kinase-lik... 62 1e-08
gnl|LJGI|TC65334 similar to UniRef100_A7P186 Cluster: Chromosome... 58 2e-07
gnl|LJGI|FS320258 weakly similar to UniRef100_Q01963 Cluster: S-... 54 3e-06
>gnl|LJGI|FS319460 weakly similar to UniRef100_A7P197 Cluster: Chromosome chr19
scaffold_4, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr19 scaffold_4, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (15%)
Length = 729
Score = 577 bits (291), Expect = e-164
Identities = 298/299 (99%), Gaps = 1/299 (0%)
Strand = Plus / Plus
Query: 1 atgatgataatgatgatgagaatccagagaatgaagctcaaattctatggcagagctttg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 432 atgatgataatgatgatgagaatccagagaatgaagctcaaattctatggcagagctttg 491
Query: 61 actacccttgtgacacactgttaccaggaatggaaacttgggaaggacttaagaaccggt 120
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 492 actacccttgtgacacactgttaccaggaatg-aaacttgggaaggacttaagaaccggt 550
Query: 121 tttgatcgacgcctggtggcgtggaagaacgaaaacgacccttcacctgggaacttctca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 551 tttgatcgacgcctggtggcgtggaagaacgaaaacgacccttcacctgggaacttctca 610
Query: 181 tggggcatgcatgtgaccaattaccctgaaccaatgatgtggattggttcaagaaaaagc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 611 tggggcatgcatgtgaccaattaccctgaaccaatgatgtggattggttcaagaaaaagc 670
Query: 241 ttcaacagcggtccgtggaatggagttcagtacagcggcaaaccaacatcaagaccgca 299
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 671 ttcaacagcggtccgtggaatggagttcagtacagcggcaaaccaacatcaagaccgca 729
>gnl|LJGI|FS346352 weakly similar to UniRef100_A7P172 Cluster: Chromosome chr19
scaffold_4, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr19 scaffold_4, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (15%)
Length = 626
Score = 305 bits (154), Expect = 5e-82
Identities = 154/154 (100%)
Strand = Plus / Minus
Query: 1612 tatggatacatggcaccggaatatgcaattgatgggaacttctcagtgaaatctgatgtc 1671
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 626 tatggatacatggcaccggaatatgcaattgatgggaacttctcagtgaaatctgatgtc 567
Query: 1672 tttagctttggcattttgctgctagagattgtatcaggaaagaaaaatatagggaatggg 1731
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 566 tttagctttggcattttgctgctagagattgtatcaggaaagaaaaatatagggaatggg 507
Query: 1732 aagcaagaagaaaataaaaaccttattgcatatg 1765
||||||||||||||||||||||||||||||||||
Sbjct: 506 aagcaagaagaaaataaaaaccttattgcatatg 473
>gnl|LJGI|TC57130 UniRef100_Q70I30 Cluster: S-receptor kinase-like protein 1; n=1;
Lotus japonicus|Rep: S-receptor kinase-like protein 1 -
Lotus japonicus, complete
Length = 2061
Score = 93.7 bits (47), Expect = 4e-18
Identities = 92/107 (85%)
Strand = Plus / Plus
Query: 1444 cttctctatcttcatcaagactccacactcagaatcattcatagagatctcaaagcaagt 1503
|||||||||||||| |||||||| | ||| |||||||| ||||||||||| ||| | |||
Sbjct: 1447 cttctctatcttcaccaagactcaagactaagaatcatccatagagatctgaaaactagt 1506
Query: 1504 aacgttttacttgatagtgagatgaacccaaagatctcagactttgg 1550
||| || | ||||||| ||| |||||||||||||| ||||| |||||
Sbjct: 1507 aacattcttcttgataatgaaatgaacccaaagatatcagattttgg 1553
>gnl|LJGI|NP840531 GB|AJ580824.1|CAE45595.1 S-receptor kinase-like protein 2 [Lotus
corniculatus var. japonicus]
Length = 2598
Score = 69.9 bits (35), Expect = 5e-11
Identities = 89/107 (83%)
Strand = Plus / Plus
Query: 1444 cttctctatcttcatcaagactccacactcagaatcattcatagagatctcaaagcaagt 1503
||||| ||||||||||||||||| | | | |||||||| || |||||||| ||| | |||
Sbjct: 1984 cttctttatcttcatcaagactcaagattaagaatcatccacagagatctgaaaactagt 2043
Query: 1504 aacgttttacttgatagtgagatgaacccaaagatctcagactttgg 1550
||| || | |||||| ||| |||||||||||||| ||||| |||||
Sbjct: 2044 aacattcttcttgatgatgaaatgaacccaaagatatcagattttgg 2090
Score = 60.0 bits (30), Expect = 5e-08
Identities = 54/62 (87%)
Strand = Plus / Plus
Query: 1232 aggaattcaaaaacgaaatcaaattgatagccaaacttcaacaccgcaatctcgtaagac 1291
|||| |||||||| |||||||| |||||||| | |||||| ||||||||||| |||| ||
Sbjct: 1790 aggagttcaaaaatgaaatcaagttgatagcaagacttcagcaccgcaatcttgtaaaac 1849
Query: 1292 tt 1293
||
Sbjct: 1850 tt 1851
>gnl|LJGI|TC81772 UniRef100_Q70I29 Cluster: S-receptor kinase-like protein 2; n=1;
Lotus japonicus|Rep: S-receptor kinase-like protein 2 -
Lotus japonicus, complete
Length = 3378
Score = 69.9 bits (35), Expect = 5e-11
Identities = 89/107 (83%)
Strand = Plus / Plus
Query: 1444 cttctctatcttcatcaagactccacactcagaatcattcatagagatctcaaagcaagt 1503
||||| ||||||||||||||||| | | | |||||||| || |||||||| ||| | |||
Sbjct: 2416 cttctttatcttcatcaagactcaagattaagaatcatccacagagatctgaaaactagt 2475
Query: 1504 aacgttttacttgatagtgagatgaacccaaagatctcagactttgg 1550
||| || | |||||| ||| |||||||||||||| ||||| |||||
Sbjct: 2476 aacattcttcttgatgatgaaatgaacccaaagatatcagattttgg 2522
Score = 60.0 bits (30), Expect = 5e-08
Identities = 54/62 (87%)
Strand = Plus / Plus
Query: 1232 aggaattcaaaaacgaaatcaaattgatagccaaacttcaacaccgcaatctcgtaagac 1291
|||| |||||||| |||||||| |||||||| | |||||| ||||||||||| |||| ||
Sbjct: 2222 aggagttcaaaaatgaaatcaagttgatagcaagacttcagcaccgcaatcttgtaaaac 2281
Query: 1292 tt 1293
||
Sbjct: 2282 tt 2283
>gnl|LJGI|TC57128 UniRef100_Q70I28 Cluster: S-receptor kinase-like protein 3; n=1;
Lotus japonicus|Rep: S-receptor kinase-like protein 3 -
Lotus japonicus, complete
Length = 2481
Score = 65.9 bits (33), Expect = 8e-10
Identities = 66/77 (85%)
Strand = Plus / Plus
Query: 1474 agaatcattcatagagatctcaaagcaagtaacgttttacttgatagtgagatgaaccca 1533
||||| || ||||||||||| ||| | |||||| || | ||||||||||| |||||||||
Sbjct: 1726 agaattatccatagagatctgaaaactagtaacattcttcttgatagtgaaatgaaccca 1785
Query: 1534 aagatctcagactttgg 1550
||||| ||||| |||||
Sbjct: 1786 aagatatcagattttgg 1802
>gnl|LJGI|TC81649 UniRef100_Q70I29 Cluster: S-receptor kinase-like protein 2; n=1;
Lotus japonicus|Rep: S-receptor kinase-like protein 2 -
Lotus japonicus, partial (32%)
Length = 1047
Score = 61.9 bits (31), Expect = 1e-08
Identities = 88/107 (82%)
Strand = Plus / Plus
Query: 1444 cttctctatcttcatcaagactccacactcagaatcattcatagagatctcaaagcaagt 1503
||||| ||||||||||||||||| | | | |||||||| || |||||||| ||| | |||
Sbjct: 655 cttctttatcttcatcaagactcaagattaagaatcatccacagagatctgaaaactagt 714
Query: 1504 aacgttttacttgatagtgagatgaacccaaagatctcagactttgg 1550
||| || | |||||| ||| |||||||| ||||| ||||| |||||
Sbjct: 715 aacattcttcttgatgatgaaatgaaccccaagatatcagattttgg 761
Score = 60.0 bits (30), Expect = 5e-08
Identities = 54/62 (87%)
Strand = Plus / Plus
Query: 1232 aggaattcaaaaacgaaatcaaattgatagccaaacttcaacaccgcaatctcgtaagac 1291
|||| |||||||| |||||||| |||||||| | |||||| ||||||||||| |||| ||
Sbjct: 443 aggagttcaaaaatgaaatcaagttgatagcaagacttcagcaccgcaatcttgtaaaac 502
Query: 1292 tt 1293
||
Sbjct: 503 tt 504
>gnl|LJGI|TC65334 similar to UniRef100_A7P186 Cluster: Chromosome chr19 scaffold_4,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr19 scaffold_4, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (34%)
Length = 1193
Score = 58.0 bits (29), Expect = 2e-07
Identities = 47/53 (88%)
Strand = Plus / Plus
Query: 1135 ggagaaggtggttttggacccgtatacaagggaaggttggaaaatggacaaga 1187
||||||||||| |||||||| ||||||||||||| |||| | ||||||||||
Sbjct: 3 ggagaaggtggctttggaccagtatacaagggaatgttgatagatggacaaga 55
>gnl|LJGI|FS320258 weakly similar to UniRef100_Q01963 Cluster: S-locus receptor kinase
precursor; n=2; Brassica napus|Rep: S-locus receptor
kinase precursor - Brassica napus var. napus, partial
(14%)
Length = 744
Score = 54.0 bits (27), Expect = 3e-06
Identities = 39/43 (90%)
Strand = Plus / Plus
Query: 46 tatggcagagctttgactacccttgtgacacactgttaccagg 88
|||||||||||||||| | |||||||| ||||||||||||||
Sbjct: 573 tatggcagagctttgatcatccttgtgatacactgttaccagg 615