Miyakogusa Predicted Gene

Lj1g3v2023010.1

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj1g3v2023010.1 tr|B9I7H2|B9I7H2_POPTR Predicted protein
OS=Populus trichocarpa GN=POPTRDRAFT_807069 PE=4
SV=1,52.78,0,seg,NULL; PROTEIN_KINASE_ST,Serine/threonine-protein
kinase, active site; divergent subfamily of APP,CUFF.28272.1
         (1692 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|AV409113 weakly similar to UniRef100_Q39502 Cluster: OR...   609   e-173
gnl|LJGI|FS346352 weakly similar to UniRef100_A7P172 Cluster: Ch...    70   5e-11
gnl|LJGI|TC78676 weakly similar to UniRef100_A7P169 Cluster: Chr...    66   8e-10

>gnl|LJGI|AV409113 weakly similar to UniRef100_Q39502 Cluster: ORF111; n=1;
           Cylindrotheca fusiformis|Rep: ORF111 - Cylindrotheca
           fusiformis (Marine diatom), partial (20%)
          Length = 360

 Score =  609 bits (307), Expect = e-173
 Identities = 307/307 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   atggatcaaaacctgttccaactttccatgtttactcttacaataatcagttttcgattt 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 54  atggatcaaaacctgttccaactttccatgtttactcttacaataatcagttttcgattt 113

                                                                       
Query: 61  ctctttgcagtagtggcaaaggatcaaaacatttctggtatatcagatgataactactgt 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 114 ctctttgcagtagtggcaaaggatcaaaacatttctggtatatcagatgataactactgt 173

                                                                       
Query: 121 agcaataatagagtctgcggagccaattcgaactgtgatgttacaaaaggaacagcttgt 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 174 agcaataatagagtctgcggagccaattcgaactgtgatgttacaaaaggaacagcttgt 233

                                                                       
Query: 181 gtttgtttagatggattcaaactcaaatcaataagtggatgggatcctgcggactataca 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 234 gtttgtttagatggattcaaactcaaatcaataagtggatgggatcctgcggactataca 293

                                                                       
Query: 241 caaggttgtgtacgtgataaagcattgaattgttcaacagatcatgtgttcaccaaatat 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 294 caaggttgtgtacgtgataaagcattgaattgttcaacagatcatgtgttcaccaaatat 353

                  
Query: 301 agtgtgt 307
           |||||||
Sbjct: 354 agtgtgt 360


>gnl|LJGI|FS346352 weakly similar to UniRef100_A7P172 Cluster: Chromosome chr19
            scaffold_4, whole genome shotgun sequence; n=1; Vitis
            vinifera|Rep: Chromosome chr19 scaffold_4, whole genome
            shotgun sequence - Vitis vinifera (Grape), partial (15%)
          Length = 626

 Score = 69.9 bits (35), Expect = 5e-11
 Identities = 74/87 (85%)
 Strand = Plus / Minus

                                                                        
Query: 1251 tggatacatggccccggaatatgctgttaacggacaattttcagtgaaatctgatgtctt 1310
            |||||||||||| |||||||||||  || | ||  | || ||||||||||||||||||||
Sbjct: 624  tggatacatggcaccggaatatgcaattgatgggaacttctcagtgaaatctgatgtctt 565

                                       
Query: 1311 tagcttcgggattttggtgcttgagat 1337
            |||||| || |||||| |||| |||||
Sbjct: 564  tagctttggcattttgctgctagagat 538



 Score = 61.9 bits (31), Expect = 1e-08
 Identities = 100/123 (81%)
 Strand = Plus / Minus

                                                                        
Query: 1474 tctgaagtgcagcgctgcatccatattggcttactctgtgcacaacagcatcctcaggac 1533
            |||||||||| ||| |||||||||||| | ||  | |||   || |||||||| || || 
Sbjct: 401  tctgaagtgctgcgttgcatccatattagttttttgtgtctgcagcagcatccacaagaa 342

                                                                        
Query: 1534 aggccaagcatgtcatctgtggttctgatgttgggtagtgaaattgacttgcctcaaccc 1593
            || |||| |||||| |||||  |  ||||||||||||||||||||| | |||||||||||
Sbjct: 341  agaccaaacatgtcttctgttatgatgatgttgggtagtgaaattggcctgcctcaaccc 282

               
Query: 1594 aaa 1596
            |||
Sbjct: 281  aaa 279


>gnl|LJGI|TC78676 weakly similar to UniRef100_A7P169 Cluster: Chromosome chr19
            scaffold_4, whole genome shotgun sequence; n=1; Vitis
            vinifera|Rep: Chromosome chr19 scaffold_4, whole genome
            shotgun sequence - Vitis vinifera (Grape), partial (10%)
          Length = 440

 Score = 65.9 bits (33), Expect = 8e-10
 Identities = 75/89 (84%)
 Strand = Plus / Plus

                                                                        
Query: 1507 ctctgtgcacaacagcatcctcaggacaggccaagcatgtcatctgtggttctgatgttg 1566
            |||||||  ||||| |||||| |||| ||||||| ||||||| |||||||| ||||||||
Sbjct: 187  ctctgtgttcaacaacatcctgaggataggccaaacatgtcaactgtggttgtgatgttg 246

                                         
Query: 1567 ggtagtgaaattgacttgcctcaacccaa 1595
             | || || | || |||||||||||||||
Sbjct: 247  agcagcgagagtgccttgcctcaacccaa 275