Miyakogusa Predicted Gene

Lj1g3v2012980.2
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj1g3v2012980.2 tr|A9T595|A9T595_PHYPA Predicted protein
(Fragment) OS=Physcomitrella patens subsp. patens
GN=PHYPAD,33.86,6e-19,LRR_7,NULL; RNI-like,NULL; no description,NULL;
LEUCINE-RICH REPEAT-CONTAINING PROTEIN,NULL,CUFF.28326.2
         (2745 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC80619 similar to UniRef100_Q75K99 Cluster: Expressed ...    68   3e-10
gnl|LJGI|BW596783 weakly similar to UniRef100_Q6YDF1 Cluster: Re...    60   8e-08
gnl|LJGI|BP063299 weakly similar to UniRef100_A7PYR0 Cluster: Ch...    54   5e-06

>gnl|LJGI|TC80619 similar to UniRef100_Q75K99 Cluster: Expressed protein; n=1; Oryza
            sativa Japonica Group|Rep: Expressed protein - Oryza
            sativa subsp. japonica (Rice), partial (20%)
          Length = 711

 Score = 67.9 bits (34), Expect = 3e-10
 Identities = 70/82 (85%)
 Strand = Plus / Plus

                                                                        
Query: 2637 caaagtcatagcagcatggaagatgcgaaagcaatacttgcacagtaatcgaaactccta 2696
            ||||||||||| ||||| || ||||  |||||||| ||||||| |||||||| |||||||
Sbjct: 179  caaagtcatagtagcatagaggatgacaaagcaattcttgcaccgtaatcgatactccta 238

                                  
Query: 2697 tactccagaggttgaatttaac 2718
            |||| | || | ||||||||||
Sbjct: 239  tacttcggaagatgaatttaac 260


>gnl|LJGI|BW596783 weakly similar to UniRef100_Q6YDF1 Cluster: Resistance protein;
           n=1; Arachis cardenasii|Rep: Resistance protein -
           Arachis cardenasii, partial (31%)
          Length = 482

 Score = 60.0 bits (30), Expect = 8e-08
 Identities = 81/98 (82%)
 Strand = Plus / Plus

                                                                       
Query: 607 aaggaagatcttattcatctttggatggctaatggacttatctcatcaagaggaaatttg 666
           ||||||||| | |||||||||||||||||||||||  ||||  |||| || | ||| |||
Sbjct: 297 aaggaagatttgattcatctttggatggctaatgggtttattgcatccagggaaaacttg 356

                                                 
Query: 667 gaggtggaacatgttggcaatgaggtgtggaatgaatt 704
           ||||| ||| |||| ||||||  | | |||||||||||
Sbjct: 357 gaggttgaagatgtcggcaatatgatttggaatgaatt 394


>gnl|LJGI|BP063299 weakly similar to UniRef100_A7PYR0 Cluster: Chromosome chr12
           scaffold_38, whole genome shotgun sequence; n=1; Vitis
           vinifera|Rep: Chromosome chr12 scaffold_38, whole genome
           shotgun sequence - Vitis vinifera (Grape), partial (8%)
          Length = 580

 Score = 54.0 bits (27), Expect = 5e-06
 Identities = 42/47 (89%)
 Strand = Plus / Plus

                                                          
Query: 607 aaggaagatcttattcatctttggatggctaatggacttatctcatc 653
           ||||||||||||||  ||||||||||||| |||||  ||||||||||
Sbjct: 450 aaggaagatcttatctatctttggatggccaatgggtttatctcatc 496