Miyakogusa Predicted Gene

Lj1g3v2001820.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj1g3v2001820.1 Non Chatacterized Hit- tr|I1L2T3|I1L2T3_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.30029
PE,82.18,0,CATIONIC AMINO ACID TRANSPORTER,Cationic amino acid
transporter; AMINO ACID TRANSPORTER,Amino
acid/p,NODE_113976_length_1764_cov_7.703515.path2.1
         (1656 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC73417 similar to UniRef100_A7Q1C9 Cluster: Chromosome...    90   5e-17

>gnl|LJGI|TC73417 similar to UniRef100_A7Q1C9 Cluster: Chromosome chr10 scaffold_43,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr10 scaffold_43, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (33%)
          Length = 669

 Score = 89.7 bits (45), Expect = 5e-17
 Identities = 141/173 (81%)
 Strand = Plus / Plus

                                                                       
Query: 211 ttttgctacactgagtttgctgtggaaatccctgtggctggtggttcctttgcttatatc 270
           ||||||||||| ||||| ||||||||||| ||||| || ||||| || ||||| ||  | 
Sbjct: 449 ttttgctacaccgagttcgctgtggaaattcctgttgcaggtgggtcatttgcgtactta 508

                                                                       
Query: 271 agagtggagcttggtgaatttttcgccttcatagcttcaggaaatattctcctcgagtat 330
           ||||| ||||| || || ||  | |||| ||||||  | ||||| |||||||| ||||| 
Sbjct: 509 agagtagagctaggagacttcgtggcctacatagccgccggaaacattctcctggagtac 568

                                                                
Query: 331 gtaatcggcggcgctgcagtggcacgctcatggacatcctactttgccaccct 383
           ||||| |||||||| || ||||| || |||||||| ||||| |||||||||||
Sbjct: 569 gtaataggcggcgccgccgtggctcggtcatggacctcctattttgccaccct 621