Miyakogusa Predicted Gene
- Lj1g3v1991510.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj1g3v1991510.1 Non Chatacterized Hit- tr|K3ZP38|K3ZP38_SETIT
Uncharacterized protein OS=Setaria italica
GN=Si028368,51.11,0.015,cNMP_binding,Cyclic nucleotide-binding domain;
Cyclic nucleotide-monophosphate binding doma,Cyclic n,CUFF.28246.1
(793 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC65850 homologue to UniRef100_A7QJQ9 Cluster: Chromoso... 1066 0.0
gnl|LJGI|TC64300 similar to UniRef100_A7QJQ9 Cluster: Chromosome... 98 1e-19
gnl|LJGI|FS354122 similar to UniRef100_Q8H6U2 Cluster: Cyclic nu... 62 6e-09
>gnl|LJGI|TC65850 homologue to UniRef100_A7QJQ9 Cluster: Chromosome undetermined
scaffold_107, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_107,
whole genome shotgun sequence - Vitis vinifera (Grape),
partial (21%)
Length = 739
Score = 1066 bits (538), Expect = 0.0
Identities = 541/542 (99%)
Strand = Plus / Plus
Query: 1 atgcatttgaaatggaatagtttcttgaagttcatgacacaccatgcaatggctttcttt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 197 atgcatttgaaatggaatagtttcttgaagttcatgacacaccatgcaatggctttcttt 256
Query: 61 ctccaccaattacaggttcccttcttttcccaaatggatgctcagctacttgatgcaata 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 257 ctccaccaattacaggttcccttcttttcccaaatggatgctcagctacttgatgcaata 316
Query: 121 tgtgagagattggtatcatccttgagtactcaaggcacatacatagtcagagaaggagat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 317 tgtgagagattggtatcatccttgagtactcaaggcacatacatagtcagagaaggagat 376
Query: 181 ccagctacagagatgctttttatcattagagggaaacttgaaagctcaactacaaatgga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 377 ccagctacagagatgctttttatcattagagggaaacttgaaagctcaactacaaatgga 436
Query: 241 ggtagaactggtttcttcaactcaattaccttaagacctggtgatttctgtggagaagag 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 437 ggtagaactggtttcttcaactcaattaccttaagacctggtgatttctgtggagaagag 496
Query: 301 ctactagcttgggcattgcttccaaaatccactctcaacttgccttcttctacaagaaca 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 497 ctactagcttgggcattgcttccaaaatccactctcaacttgccttcttctacaagaaca 556
Query: 361 gttaaagcccttgtagaagtggaagcctttgcattaagagcagaagatcttaaatttgtg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 557 gttaaagcccttgtagaagtggaagcctttgcattaagagcagaagatcttaaatttgtg 616
Query: 421 gccaaccagtttcgacgtctccacagcaagaaattgcagcataccttccgtttctactct 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 617 gccaaccagtttcgacgtctccacagcaagaaattgcagcataccttccgtttctactct 676
Query: 481 catcattggaggacatgggcttcttgcttcattcaagctgcatggcgccggtacaagaag 540
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 677 catcattggaggacatgggcttcttgcttcattcaagctgtatggcgccggtacaagaag 736
Query: 541 ag 542
||
Sbjct: 737 ag 738
>gnl|LJGI|TC64300 similar to UniRef100_A7QJQ9 Cluster: Chromosome undetermined
scaffold_107, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_107,
whole genome shotgun sequence - Vitis vinifera (Grape),
partial (50%)
Length = 1557
Score = 97.6 bits (49), Expect = 1e-19
Identities = 331/425 (77%)
Strand = Plus / Plus
Query: 76 gttcccttcttttcccaaatggatgctcagctacttgatgcaatatgtgagagattggta 135
||||||||||| || |||||||||| |||||| ||||||||||| |||||| | || ||
Sbjct: 466 gttcccttcttctcacaaatggatgatcagcttcttgatgcaatttgtgagcggctgata 525
Query: 136 tcatccttgagtactcaaggcacatacatagtcagagaaggagatccagctacagagatg 195
|| || | || ||||||||||| ||||| || | |||||||| || | || || |||
Sbjct: 526 tcttctctaagcactcaaggcacctacattgttcgcgaaggagaccctgtaactgaaatg 585
Query: 196 ctttttatcattagagggaaacttgaaagctcaactacaaatggaggtagaactggtttc 255
|| || || |||||||| | |||||| || || || |||||||| ||| | | |||||||
Sbjct: 586 ctcttcattattagaggtagacttgatagttccacaacaaatggtggtcggagtggtttc 645
Query: 256 ttcaactcaattaccttaagacctggtgatttctgtggagaagagctactagcttgggca 315
|||||||| || | || ||||| || ||||| ||||| || || ||||| |||||||
Sbjct: 646 ttcaactctatcatattgagaccgggagatttttgtggtgaggaactactttcttgggct 705
Query: 316 ttgcttccaaaatccactctcaacttgccttcttctacaagaacagttaaagcccttgta 375
|| || |||||||| || | || ||||||||||| || || ||||||||||||||
Sbjct: 706 ttactcccaaaatcaacagtaaatttgccttcttcaaccaggacagttaaagccctgagt 765
Query: 376 gaagtggaagcctttgcattaagagcagaagatcttaaatttgtggccaaccagtttcga 435
|| || ||||| ||||| | | || ||||| || || ||||| |||||||| ||| |
Sbjct: 766 gaggttgaagcttttgctcttcgggctgaagacctcaagtttgtcgccaaccaatttagg 825
Query: 436 cgtctccacagcaagaaattgcagcataccttccgtttctactctcatcattggaggaca 495
|| |||||||||||||| ||||||| || || | || ||||| || |||||||||||
Sbjct: 826 cgcctccacagcaagaagctgcagcacacatttagattttactcccaccattggaggact 885
Query: 496 tgggc 500
|||||
Sbjct: 886 tgggc 890
>gnl|LJGI|FS354122 similar to UniRef100_Q8H6U2 Cluster: Cyclic nucleotide-gated
channel B; n=1; Phaseolus vulgaris|Rep: Cyclic
nucleotide-gated channel B - Phaseolus vulgaris (Kidney
bean) (French bean), partial (95%)
Length = 619
Score = 61.9 bits (31), Expect = 6e-09
Identities = 61/71 (85%)
Strand = Plus / Minus
Query: 457 cagcataccttccgtttctactctcatcattggaggacatgggcttcttgcttcattcaa 516
||||| |||||||| || ||||| || || |||||||| |||||| | ||||||||||||
Sbjct: 572 cagcacaccttccgcttttactcccaacaatggaggacctgggctgcatgcttcattcaa 513
Query: 517 gctgcatggcg 527
|| ||||||||
Sbjct: 512 gcagcatggcg 502