Miyakogusa Predicted Gene
- Lj1g3v1991490.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj1g3v1991490.1 Non Chatacterized Hit- tr|I1M0D7|I1M0D7_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,57.45,0,seg,NULL;
SUBFAMILY NOT NAMED,NULL; FAMILY NOT NAMED,NULL; DUF382,Domain of
unknown function DUF382;,CUFF.28240.1
(1066 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC58527 similar to UniRef100_A7QYP7 Cluster: Chromosome... 341 5e-93
gnl|LJGI|AV412670 similar to UniRef100_A2Q200 Cluster: PSP, prol... 238 6e-62
gnl|LJGI|TC74478 similar to UniRef100_A2Q200 Cluster: PSP, proli... 238 6e-62
gnl|LJGI|BP049935 similar to UniRef100_Q9SVT1 Cluster: Spliceoso... 121 9e-27
gnl|LJGI|TC78197 similar to UniRef100_A2Q200 Cluster: PSP, proli... 121 9e-27
>gnl|LJGI|TC58527 similar to UniRef100_A7QYP7 Cluster: Chromosome undetermined
scaffold_252, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_252,
whole genome shotgun sequence - Vitis vinifera (Grape),
partial (36%)
Length = 802
Score = 341 bits (172), Expect = 5e-93
Identities = 223/240 (92%)
Strand = Plus / Plus
Query: 361 cttcaacggaggatgaaaattgctgaactgaaacgaatttgctcaaggcctgatgttgtt 420
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 540 cttcaacggaggatgaaaattgctgaactgaaacaaatttgctcaaggcctgatgttgtt 599
Query: 421 gaagtgtgggatgctactgcatctgatccaaagttgctggtgtttttgaaatcttgtaga 480
|| |||||||||||||||||||| || |||||||||||||||||||||||||||| |||
Sbjct: 600 gaggtgtgggatgctactgcatcagacccaaagttgctggtgtttttgaaatcttatagg 659
Query: 481 aatactgtacctgtgcctaggcattggagtaggaagaggaaatttttgcaggggaaaata 540
|| ||||||||||||||||||||||||||| |||||| |||||||||||||||||| |
Sbjct: 660 aacactgtacctgtgcctaggcattggagtcagaagagaaaatttttgcaggggaaacga 719
Query: 541 ggtattgagatagagccctttcagcttcctgaatttgttgctgccactggaattgagaaa 600
|||||||||| | ||||||||||||||||||| || |||||||||||||||||||||||
Sbjct: 720 ggtattgagaaacagccctttcagcttcctgatttcattgctgccactggaattgagaaa 779
Score = 113 bits (57), Expect = 2e-24
Identities = 104/120 (86%), Gaps = 6/120 (5%)
Strand = Plus / Plus
Query: 158 ttgaaattgagtatttaccggagaagggagagctagatgaagaagaaggcatggatgaag 217
|||||||||||||| | |||||||||| ||||||||||||| ||||||||||||
Sbjct: 298 ttgaaattgagtatgtgccggagaaggcggagctagatgaag------gcatggatgaag 351
Query: 218 aatttagaagaatctttacgaaattcagttttagtgatttcgctggttctaaggatactg 277
||||||||||||||||| ||| |||||||| |||||| ||||||||||| |||||||||
Sbjct: 352 aatttagaagaatctttgagaagttcagtttcagtgatgtcgctggttctgaggatactg 411
>gnl|LJGI|AV412670 similar to UniRef100_A2Q200 Cluster: PSP, proline-rich; n=1;
Medicago truncatula|Rep: PSP, proline-rich - Medicago
truncatula (Barrel medic), partial (16%)
Length = 391
Score = 238 bits (120), Expect = 6e-62
Identities = 183/204 (89%)
Strand = Plus / Plus
Query: 369 gaggatgaaaattgctgaactgaaacgaatttgctcaaggcctgatgttgttgaagtgtg 428
|||||||||||||||||||||||||| ||||||||||||||| |||||||||| | |||
Sbjct: 185 gaggatgaaaattgctgaactgaaacatatttgctcaaggccttatgttgttgaggcgtg 244
Query: 429 ggatgctactgcatctgatccaaagttgctggtgtttttgaaatcttgtagaaatactgt 488
||||||||||||||| || |||||||||||||||||||||||||||| ||| ||||||||
Sbjct: 245 ggatgctactgcatcagacccaaagttgctggtgtttttgaaatcttataggaatactgt 304
Query: 489 acctgtgcctaggcattggagtaggaagaggaaatttttgcaggggaaaataggtattga 548
|||||||||||| ||||||||| |||||| || |||||||||||| || |||||| ||
Sbjct: 305 acctgtgcctagacattggagtcagaagagaaagtttttgcagggggaacgaggtatcga 364
Query: 549 gatagagccctttcagcttcctga 572
|| | | |||||||||||||||||
Sbjct: 365 gaaacaaccctttcagcttcctga 388
>gnl|LJGI|TC74478 similar to UniRef100_A2Q200 Cluster: PSP, proline-rich; n=1;
Medicago truncatula|Rep: PSP, proline-rich - Medicago
truncatula (Barrel medic), partial (42%)
Length = 1189
Score = 238 bits (120), Expect = 6e-62
Identities = 215/243 (88%), Gaps = 4/243 (1%)
Strand = Plus / Plus
Query: 361 cttcaacggaggatgaaaattgctgaactgaaacgaatttgctcaaggcctgatgttgtt 420
||||||| |||||||||||||||||||||||||| ||||||||||||||| ||||||||
Sbjct: 178 cttcaacagaggatgaaaattgctgaactgaaacatatttgctcaaggccttatgttgtt 237
Query: 421 gaagtgtgggatgctactgcatctgatccaaag--ttgctggtgtttttgaaatcttgta 478
|| | |||||||||||||||||| || |||||| |||||||||||||||||||||| ||
Sbjct: 238 gaggcgtgggatgctactgcatcagacccaaaggtttgctggtgtttttgaaatcttata 297
Query: 479 gaaatactgtacctgtgcctaggcattggagtaggaagaggaa-atttttgcaggggaaa 537
| |||||||||||||||||||| ||||||||| |||||| || |||||||||||| ||
Sbjct: 298 ggaatactgtacctgtgcctagacattggagtcagaagagaaaggtttttgcagggg-aa 356
Query: 538 ataggtattgagatagagccctttcagcttcctgaatttgttgctgccactggaattgag 597
|||||| |||| | | ||||||||||||||||| || ||||||||||||||||||||
Sbjct: 357 cgaggtatcgagaaacaaccctttcagcttcctgatttcattgctgccactggaattgag 416
Query: 598 aaa 600
|||
Sbjct: 417 aaa 419
Score = 200 bits (101), Expect = 1e-50
Identities = 172/196 (87%), Gaps = 6/196 (3%)
Strand = Plus / Plus
Query: 632 caaaattggggagaatggagatagactacaaggttctacatgatgcatttttcaagtacc 691
||||| |||||| |||||| |||||||| || |||| ||||||||||||||||||||||
Sbjct: 490 caaaaatggggaaaatggacatagactatcagattcttcatgatgcatttttcaagtacc 549
Query: 692 agaggaagccaaaactgagttctgttggggaggtgtatcatgaaggaaaagaatttgagg 751
||| |||||||| |||| |||| |||||||| |||||||||||||||||||||||||||
Sbjct: 550 agacaaagccaaagctgacttctcttggggagctgtatcatgaaggaaaagaatttgagg 609
Query: 752 tgaagttgagggagatgaaactgaaagctggtgtgttatcacatgaattgaaagaagctc 811
| ||||||||||||||||||| ||| |||||||||||||||||||||||||||
Sbjct: 610 taaagttgagggagatgaaac------ctgacatgttatcacatgaattgaaagaagctc 663
Query: 812 ttggtatgcctgaggg 827
|||||||||||||||
Sbjct: 664 ctggtatgcctgaggg 679
Score = 61.9 bits (31), Expect = 8e-09
Identities = 43/47 (91%)
Strand = Plus / Plus
Query: 890 ctaactatgaggaggagtcagttgataatacaaaacactggggtgat 936
||||||||||||||||| ||||| |||||| |||||||||||||||
Sbjct: 688 ctaactatgaggaggagccagtttttaataccaaacactggggtgat 734
>gnl|LJGI|BP049935 similar to UniRef100_Q9SVT1 Cluster: Spliceosome associated
protein-like; n=1; Arabidopsis thaliana|Rep: Spliceosome
associated protein-like - Arabidopsis thaliana
(Mouse-ear cress), partial (8%)
Length = 425
Score = 121 bits (61), Expect = 9e-27
Identities = 100/112 (89%), Gaps = 2/112 (1%)
Strand = Plus / Minus
Query: 424 gtgtgggatgctactgcatctgatccaaagttgctggtgtttttgaaatcttgtagaaat 483
|||||||||||||||||||| || ||||||||||||| |||||||||||||| ||| |||
Sbjct: 300 gtgtgggatgctactgcatcagacccaaagttgctggggtttttgaaatcttatagcaat 241
Query: 484 actgtacctgtgcctaggcattggagtaggaagaggaaatttttgcagggga 535
|| |||||| ||||||||||||||||| |||||| | |||||||||||||
Sbjct: 240 accgtacctatgcctaggcattggagtcagaagag--agtttttgcagggga 191
>gnl|LJGI|TC78197 similar to UniRef100_A2Q200 Cluster: PSP, proline-rich; n=1;
Medicago truncatula|Rep: PSP, proline-rich - Medicago
truncatula (Barrel medic), partial (9%)
Length = 538
Score = 121 bits (61), Expect = 9e-27
Identities = 100/112 (89%), Gaps = 2/112 (1%)
Strand = Plus / Plus
Query: 424 gtgtgggatgctactgcatctgatccaaagttgctggtgtttttgaaatcttgtagaaat 483
|||||||||||||||||||| || ||||||||||||| |||||||||||||| ||| |||
Sbjct: 225 gtgtgggatgctactgcatcagacccaaagttgctggggtttttgaaatcttatagcaat 284
Query: 484 actgtacctgtgcctaggcattggagtaggaagaggaaatttttgcagggga 535
|| |||||| ||||||||||||||||| |||||| | |||||||||||||
Sbjct: 285 accgtacctatgcctaggcattggagtcagaagag--agtttttgcagggga 334