Miyakogusa Predicted Gene

Lj1g3v1968360.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj1g3v1968360.1 Non Chatacterized Hit- tr|I1JUN1|I1JUN1_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.25875
PE,87.36,3e-19,seg,NULL; coiled-coil,NULL,CUFF.28247.1
         (285 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC68804 similar to UniRef100_Q945P6 Cluster: At2g24550/...   396   e-110

>gnl|LJGI|TC68804 similar to UniRef100_Q945P6 Cluster: At2g24550/F25P17.15; n=1;
            Arabidopsis thaliana|Rep: At2g24550/F25P17.15 -
            Arabidopsis thaliana (Mouse-ear cress), partial (24%)
          Length = 1469

 Score =  396 bits (200), Expect = e-110
 Identities = 200/200 (100%)
 Strand = Plus / Plus

                                                                        
Query: 86   ttccctctgcctcatcatcctcttcttcctctttagctgaggaaaagaaacaagaagatc 145
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 873  ttccctctgcctcatcatcctcttcttcctctttagctgaggaaaagaaacaagaagatc 932

                                                                        
Query: 146  cagtgcaaatgaggcacaatagaatacctgaatcttatgctgctcacatgaggctcagac 205
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 933  cagtgcaaatgaggcacaatagaatacctgaatcttatgctgctcacatgaggctcagac 992

                                                                        
Query: 206  tagggagcttcaagtcaagaagcttttctctagcagatctgcaagaacatgatgatgagg 265
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 993  tagggagcttcaagtcaagaagcttttctctagcagatctgcaagaacatgatgatgagg 1052

                                
Query: 266  aagaagatgatcactattaa 285
            ||||||||||||||||||||
Sbjct: 1053 aagaagatgatcactattaa 1072



 Score = 83.8 bits (42), Expect = 5e-16
 Identities = 42/42 (100%)
 Strand = Plus / Plus

                                                     
Query: 1   atgcctctttttcctgtgactgaggatcttgatgatgattat 42
           ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 788 atgcctctttttcctgtgactgaggatcttgatgatgattat 829