Miyakogusa Predicted Gene
- Lj1g3v1967300.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj1g3v1967300.1 Non Chatacterized Hit- tr|I1K941|I1K941_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.23233
PE,73.06,0,zf-RING_2,Zinc finger, RING-type; coiled-coil,NULL; no
description,Zinc finger, RING/FYVE/PHD-type; ,CUFF.28230.1
(1608 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC62674 similar to UniRef100_A7P4X9 Cluster: Chromosome... 2117 0.0
gnl|LJGI|FS337062 weakly similar to UniRef100_A7P4X9 Cluster: Ch... 1106 0.0
gnl|LJGI|TC74006 similar to UniRef100_A7P4X9 Cluster: Chromosome... 559 e-158
gnl|LJGI|BP073862 similar to UniRef100_A7P4X9 Cluster: Chromosom... 107 2e-22
>gnl|LJGI|TC62674 similar to UniRef100_A7P4X9 Cluster: Chromosome chr4 scaffold_6,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr4 scaffold_6, whole genome shotgun sequence
- Vitis vinifera (Grape), partial (26%)
Length = 1194
Score = 2117 bits (1068), Expect = 0.0
Identities = 1068/1068 (100%)
Strand = Plus / Plus
Query: 1 atggatgaatattctggtaaaagagccattagtggaatggtagtccctaaaaaggggatg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 127 atggatgaatattctggtaaaagagccattagtggaatggtagtccctaaaaaggggatg 186
Query: 61 ggccacatgtttagagatagtgctaatactagagatcaaaatggtcaagtatgcagccgc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 187 ggccacatgtttagagatagtgctaatactagagatcaaaatggtcaagtatgcagccgc 246
Query: 121 gttggttgcagcagcggagtcaactctcctaaaggtactcgaattggttcttttgaaaag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 247 gttggttgcagcagcggagtcaactctcctaaaggtactcgaattggttcttttgaaaag 306
Query: 181 ggaaaatctttgaggccttcaatgcgatcttccaatggaaaggaagcaattggaagctct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 307 ggaaaatctttgaggccttcaatgcgatcttccaatggaaaggaagcaattggaagctct 366
Query: 241 tctcgaacttcttctgggacaagtaacacaggaaaacctgttaagaaggctcagaaaaca 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 367 tctcgaacttcttctgggacaagtaacacaggaaaacctgttaagaaggctcagaaaaca 426
Query: 301 ctatcatctcagttagagacagattcatctgaaaccagtagcgtacaagatgaaccagaa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 427 ctatcatctcagttagagacagattcatctgaaaccagtagcgtacaagatgaaccagaa 486
Query: 361 gtttcaaagcctgtccctccacctgaaaaggttcagagagggcttcatggtgaagtagaa 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 487 gtttcaaagcctgtccctccacctgaaaaggttcagagagggcttcatggtgaagtagaa 546
Query: 421 aactcagagtctggtaatgtcacgcggaccgaaggagggagctctagtttagtatctaat 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 547 aactcagagtctggtaatgtcacgcggaccgaaggagggagctctagtttagtatctaat 606
Query: 481 acaagatcgcggaggaagcctgccctacgaggtcaagaaattcaaagcactggtccaggg 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 607 acaagatcgcggaggaagcctgccctacgaggtcaagaaattcaaagcactggtccaggg 666
Query: 541 acacgtgctggcactagtaggtacgggttaaggaacctcagatgcaactctatttctgat 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 667 acacgtgctggcactagtaggtacgggttaaggaacctcagatgcaactctatttctgat 726
Query: 601 gtcatccctgctggttgttcaccatcagattccacccttaacagacggaaagatatgata 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 727 gtcatccctgctggttgttcaccatcagattccacccttaacagacggaaagatatgata 786
Query: 661 aaaaagagaaattgtgaaggggaaagtagttccgctgccaaagggaagaagataagtggt 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 787 aaaaagagaaattgtgaaggggaaagtagttccgctgccaaagggaagaagataagtggt 846
Query: 721 tccttagtagaaggacggcattctggttccagaaacggtatatatatctctgattcaaga 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 847 tccttagtagaaggacggcattctggttccagaaacggtatatatatctctgattcaaga 906
Query: 781 atatctagagatgctcctcacagggataggccagacagcaactcgccatctgttagaaca 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 907 atatctagagatgctcctcacagggataggccagacagcaactcgccatctgttagaaca 966
Query: 841 cgtagatcaatcggtggtcatgccaggggaaggcttgctagccaaaatgctattccagtg 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 967 cgtagatcaatcggtggtcatgccaggggaaggcttgctagccaaaatgctattccagtg 1026
Query: 901 gaacccaatcagtcccttctcatgataccttcttttccacattctggtcatcttaatgct 960
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1027 gaacccaatcagtcccttctcatgataccttcttttccacattctggtcatcttaatgct 1086
Query: 961 cctaatggatcacatcatactactctggagactctatcaagttcaagctctaacagtaga 1020
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1087 cctaatggatcacatcatactactctggagactctatcaagttcaagctctaacagtaga 1146
Query: 1021 accggtactagcagtgaggagttatatggtcttatgcctgtgtctcct 1068
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1147 accggtactagcagtgaggagttatatggtcttatgcctgtgtctcct 1194
>gnl|LJGI|FS337062 weakly similar to UniRef100_A7P4X9 Cluster: Chromosome chr4
scaffold_6, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr4 scaffold_6, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (21%)
Length = 749
Score = 1106 bits (558), Expect = 0.0
Identities = 558/558 (100%)
Strand = Plus / Plus
Query: 1 atggatgaatattctggtaaaagagccattagtggaatggtagtccctaaaaaggggatg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 192 atggatgaatattctggtaaaagagccattagtggaatggtagtccctaaaaaggggatg 251
Query: 61 ggccacatgtttagagatagtgctaatactagagatcaaaatggtcaagtatgcagccgc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 252 ggccacatgtttagagatagtgctaatactagagatcaaaatggtcaagtatgcagccgc 311
Query: 121 gttggttgcagcagcggagtcaactctcctaaaggtactcgaattggttcttttgaaaag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 312 gttggttgcagcagcggagtcaactctcctaaaggtactcgaattggttcttttgaaaag 371
Query: 181 ggaaaatctttgaggccttcaatgcgatcttccaatggaaaggaagcaattggaagctct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 372 ggaaaatctttgaggccttcaatgcgatcttccaatggaaaggaagcaattggaagctct 431
Query: 241 tctcgaacttcttctgggacaagtaacacaggaaaacctgttaagaaggctcagaaaaca 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 432 tctcgaacttcttctgggacaagtaacacaggaaaacctgttaagaaggctcagaaaaca 491
Query: 301 ctatcatctcagttagagacagattcatctgaaaccagtagcgtacaagatgaaccagaa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 492 ctatcatctcagttagagacagattcatctgaaaccagtagcgtacaagatgaaccagaa 551
Query: 361 gtttcaaagcctgtccctccacctgaaaaggttcagagagggcttcatggtgaagtagaa 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 552 gtttcaaagcctgtccctccacctgaaaaggttcagagagggcttcatggtgaagtagaa 611
Query: 421 aactcagagtctggtaatgtcacgcggaccgaaggagggagctctagtttagtatctaat 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 612 aactcagagtctggtaatgtcacgcggaccgaaggagggagctctagtttagtatctaat 671
Query: 481 acaagatcgcggaggaagcctgccctacgaggtcaagaaattcaaagcactggtccaggg 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 672 acaagatcgcggaggaagcctgccctacgaggtcaagaaattcaaagcactggtccaggg 731
Query: 541 acacgtgctggcactagt 558
||||||||||||||||||
Sbjct: 732 acacgtgctggcactagt 749
>gnl|LJGI|TC74006 similar to UniRef100_A7P4X9 Cluster: Chromosome chr4 scaffold_6,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr4 scaffold_6, whole genome shotgun sequence
- Vitis vinifera (Grape), partial (9%)
Length = 534
Score = 559 bits (282), Expect = e-158
Identities = 282/282 (100%)
Strand = Plus / Plus
Query: 1327 actgtgagcacagctgtaacagaggaagctctatcagaatgccttaagaaaaatccgtat 1386
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5 actgtgagcacagctgtaacagaggaagctctatcagaatgccttaagaaaaatccgtat 64
Query: 1387 caaccctcagcctcagacaatgtgacttgcaatgagaataaggatgatatcaaatgcagc 1446
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 65 caaccctcagcctcagacaatgtgacttgcaatgagaataaggatgatatcaaatgcagc 124
Query: 1447 atctgccaggaggaatatgtggctgcagatgaagtggggagtctgaaatgtgagcacaag 1506
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 125 atctgccaggaggaatatgtggctgcagatgaagtggggagtctgaaatgtgagcacaag 184
Query: 1507 tatcatgtggtttgcatacagcagtggctacggctgaagaactggtgccctatttgcaaa 1566
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 185 tatcatgtggtttgcatacagcagtggctacggctgaagaactggtgccctatttgcaaa 244
Query: 1567 gcaccagtggcgtcctctagtccttcatcatcttcccagtaa 1608
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 245 gcaccagtggcgtcctctagtccttcatcatcttcccagtaa 286
>gnl|LJGI|BP073862 similar to UniRef100_A7P4X9 Cluster: Chromosome chr4 scaffold_6,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr4 scaffold_6, whole genome shotgun sequence
- Vitis vinifera (Grape), partial (9%)
Length = 335
Score = 107 bits (54), Expect = 2e-22
Identities = 102/118 (86%)
Strand = Plus / Minus
Query: 1450 tgccaggaggaatatgtggctgcagatgaagtggggagtctgaaatgtgagcacaagtat 1509
||||||||||||||| | | |||||||||||| || | ||| |||| ||||| | | |
Sbjct: 334 tgccaggaggaatatattgttgcagatgaagttggcactctacaatgcgagcatatattt 275
Query: 1510 catgtggtttgcatacagcagtggctacggctgaagaactggtgccctatttgcaaag 1567
|||||||||||||||||| ||||||| ||||||||||| |||||||||||||||||||
Sbjct: 274 catgtggtttgcatacaggagtggctgcggctgaagaattggtgccctatttgcaaag 217