Miyakogusa Predicted Gene
- Lj1g3v1966230.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj1g3v1966230.1 tr|G7JCC9|G7JCC9_MEDTR COP9 signalosome complex
subunit 5b OS=Medicago truncatula GN=MTR_3g108790 PE,97.21,0,JAB/MPN
domain,JAB1/Mov34/MPN/PAD-1; COP9 SIGNALOSOME COMPLEX SUBUNIT 5,NULL;
EUKARYOTIC TRANSLATION,CUFF.28211.1
(1080 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC70690 similar to UniRef100_Q9FR56 Cluster: JAB; n=1; ... 2141 0.0
gnl|LJGI|TC80867 similar to UniRef100_Q7GC30 Cluster: JUN-activa... 238 6e-62
gnl|LJGI|TC65911 homologue to UniRef100_A7Q6S1 Cluster: Chromoso... 66 5e-10
>gnl|LJGI|TC70690 similar to UniRef100_Q9FR56 Cluster: JAB; n=1; Solanum
lycopersicum|Rep: JAB - Solanum lycopersicum (Tomato)
(Lycopersicon esculentum), partial (93%)
Length = 1490
Score = 2141 bits (1080), Expect = 0.0
Identities = 1080/1080 (100%)
Strand = Plus / Plus
Query: 1 atggaggtttcatcatcgtcatcatctgcaatcgcacaacaaacatgggagctcgagaac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 161 atggaggtttcatcatcgtcatcatctgcaatcgcacaacaaacatgggagctcgagaac 220
Query: 61 aacataatcccgatggacactccttcagacgattccatcttctactacgacgaagctggc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 221 aacataatcccgatggacactccttcagacgattccatcttctactacgacgaagctggc 280
Query: 121 cagaacgagttccagcgtgagaagccatgggcaaacgaccctcactacttcaagcgcgtc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 281 cagaacgagttccagcgtgagaagccatgggcaaacgaccctcactacttcaagcgcgtc 340
Query: 181 aagatctccgcactcgcgcttctcaagatggttgttcacgcgcgctccggcggcaccatc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 341 aagatctccgcactcgcgcttctcaagatggttgttcacgcgcgctccggcggcaccatc 400
Query: 241 gaagtcatgggcctcatgcaaggaaaaaccgacgccgattcgatcatcgtcatggatgct 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 401 gaagtcatgggcctcatgcaaggaaaaaccgacgccgattcgatcatcgtcatggatgct 460
Query: 301 ttcgctttgcccgttgaaggcactgaaacccgtgtcaatgcccaagctgatgcgtatgaa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 461 ttcgctttgcccgttgaaggcactgaaacccgtgtcaatgcccaagctgatgcgtatgaa 520
Query: 361 tacatggttgattattctcagaccaataagcaggctgggaggttagaaaacgttgtgggg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 521 tacatggttgattattctcagaccaataagcaggctgggaggttagaaaacgttgtgggg 580
Query: 421 tggtaccattctcatccgggttacggttgttggctttcgggtatcgatgtttctacgcag 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 581 tggtaccattctcatccgggttacggttgttggctttcgggtatcgatgtttctacgcag 640
Query: 481 atgctgaatcagcagtttcaggagccttttcttgctgttgtgattgatcctactaggact 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 641 atgctgaatcagcagtttcaggagccttttcttgctgttgtgattgatcctactaggact 700
Query: 541 gtttctgctgggaaggttgagattggggctttcaggacttaccctgaaggttataagcct 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 701 gtttctgctgggaaggttgagattggggctttcaggacttaccctgaaggttataagcct 760
Query: 601 ccagatgagcctatttctgagtatcagaccattcctttgaataaaattgaagactttggt 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 761 ccagatgagcctatttctgagtatcagaccattcctttgaataaaattgaagactttggt 820
Query: 661 gtccattgtaaacagtattattccttggatatcacttacttcaagtcctcccttgattca 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 821 gtccattgtaaacagtattattccttggatatcacttacttcaagtcctcccttgattca 880
Query: 721 cacctgttggatttgctgtggaacaaatattgggtgaatacactgtcatcttctcctctg 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 881 cacctgttggatttgctgtggaacaaatattgggtgaatacactgtcatcttctcctctg 940
Query: 781 ttgggtaatggagattacgttgctggacaaatctcggatttagctgaaaagttagagcaa 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 941 ttgggtaatggagattacgttgctggacaaatctcggatttagctgaaaagttagagcaa 1000
Query: 841 gcagagaatcagttggcgcactcacgctttgggtcactgatagcacccacacctagaaag 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1001 gcagagaatcagttggcgcactcacgctttgggtcactgatagcacccacacctagaaag 1060
Query: 901 aaagaagaagaatctccacttgctaagattactcgtgacagtgcgaaaataactgtggag 960
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1061 aaagaagaagaatctccacttgctaagattactcgtgacagtgcgaaaataactgtggag 1120
Query: 961 caagtgcatggtctaatgtcgcaggtaatcaaggatattctgttcaactcagttcaccaa 1020
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1121 caagtgcatggtctaatgtcgcaggtaatcaaggatattctgttcaactcagttcaccaa 1180
Query: 1021 gcaaacaagtctcgcacagaaacaacttctgaccctgaaccaatgattgaaagctgattc 1080
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1181 gcaaacaagtctcgcacagaaacaacttctgaccctgaaccaatgattgaaagctgattc 1240
>gnl|LJGI|TC80867 similar to UniRef100_Q7GC30 Cluster: JUN-activation-domain-binding
protein homolog; n=3; Oryza sativa|Rep:
JUN-activation-domain-binding protein homolog - Oryza
sativa (Rice), partial (11%)
Length = 574
Score = 238 bits (120), Expect = 6e-62
Identities = 165/176 (93%), Gaps = 3/176 (1%)
Strand = Plus / Plus
Query: 907 gaagaatctccacttgctaagattactcgtgacagtgcgaaaataactgtggagcaagtg 966
||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||
Sbjct: 123 gaagaatctccacttgctaagattaatcgtgacagtgcgaaaataaatgtggagcaagtg 182
Query: 967 catggtctaatgtcgcaggtaatcaaggatattctgttcaactcagttcaccaag-caaa 1025
|||||||||||||||||||||||||||||||||||||||| ||||||||||| || || |
Sbjct: 183 catggtctaatgtcgcaggtaatcaaggatattctgttcatctcagttcacccagccaca 242
Query: 1026 caagtctcgcacagaaacaacttctgaccctgaaccaatga-ttgaaagctgattc 1080
|| |||||||||||| ||||||||||| |||||||| |||| ||||||||||||||
Sbjct: 243 cacgtctcgcacagacacaacttctgatcctgaacc-atgacttgaaagctgattc 297
>gnl|LJGI|TC65911 homologue to UniRef100_A7Q6S1 Cluster: Chromosome chr12
scaffold_57, whole genome shotgun sequence; n=2; Vitis
vinifera|Rep: Chromosome chr12 scaffold_57, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (55%)
Length = 611
Score = 65.9 bits (33), Expect = 5e-10
Identities = 33/33 (100%)
Strand = Plus / Plus
Query: 846 gaatcagttggcgcactcacgctttgggtcact 878
|||||||||||||||||||||||||||||||||
Sbjct: 111 gaatcagttggcgcactcacgctttgggtcact 143