Miyakogusa Predicted Gene
- Lj1g3v1966200.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj1g3v1966200.1 Non Chatacterized Hit- tr|E3QIH3|E3QIH3_COLGM
Putative uncharacterized protein OS=Colletotrichum
gra,28.51,9e-19,seg,NULL; Nucleic acid-binding proteins,Nucleic
acid-binding, OB-fold-like; "Winged helix" DNA-bindi,CUFF.28204.1
(825 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC61399 similar to UniRef100_Q7XZT4 Cluster: RPA 32kDa;... 1598 0.0
gnl|LJGI|TC58053 similar to UniRef100_Q7XZT4 Cluster: RPA 32kDa;... 238 4e-62
>gnl|LJGI|TC61399 similar to UniRef100_Q7XZT4 Cluster: RPA 32kDa; n=1; Pisum
sativum|Rep: RPA 32kDa - Pisum sativum (Garden pea),
partial (80%)
Length = 1150
Score = 1598 bits (806), Expect = 0.0
Identities = 822/826 (99%), Gaps = 1/826 (0%)
Strand = Plus / Plus
Query: 1 atgttatcgtcctccaccaacttcgacgctaactcagccttctccggcggcggattcatg 60
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 84 atgttatcgtcctccaccaacttcgacgctaactcagccttctccggtggcggattcatg 143
Query: 61 accaccgactcctcacaccactccgactcatccccagcacccctcaaaagccgtgacact 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 144 accaccgactcctcacaccactccgactcatccccagcacccctcaaaagccgtgacact 203
Query: 121 cagggtttggttccagtcacagtgaggcagataagtgaggcttctcactctggtgatgac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 cagggtttggttccagtcacagtgaggcagataagtgaggcttctcactctggtgatgac 263
Query: 181 aagtccaatttcgtaatcaacggtgtcggtctcaccaatgtaaccttggttggaatggtg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 aagtccaatttcgtaatcaacggtgtcggtctcaccaatgtaaccttggttggaatggtg 323
Query: 241 tttgagaaagttgagaaaaacactgaagttaactttgttttagatgatggaacaggaaga 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 tttgagaaagttgagaaaaacactgaagttaactttgttttagatgatggaacaggaaga 383
Query: 301 atcaaatgtaggagatgggtgaatgaaacttatgatacgaaggaaa-tggatcaaataca 359
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 384 atcaaatgtaggagatgggtgaatgaaacttatgatacgaaggaaaatggatcaaataca 443
Query: 360 ggacggtatgtatgttcgcctttatggccatttgaagagctttcaaggtgtaaggcaact 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 ggacggtatgtatgttcgcctttatggccatttgaagagctttcaaggtgtaaggcaact 503
Query: 420 cgttgccttctctgtgaggcctgtgacaaattttgatgagataccttttcacttcattga 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 cgttgccttctctgtgaggcctgtgacaaattttgatgagataccttttcacttcattga 563
Query: 480 ttgcatacacaaccatctctattccaaagttaaggttgaaggaatcacagggaatcctcc 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 ttgcatacacaaccatctctattccaaagttaaggttgaaggaatcacagggaatcctcc 623
Query: 540 atcatcagacttatcattgattgcagccagaaatgcaccaaatcaagcagcatcatcaaa 599
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 624 atcatcagacttatcattgatagcagccagaaatgcaccaaatcaagcagcatcatcaaa 683
Query: 600 cccgttatatgcgcatggtgtggatcaactcaagggctgtgataaattggtttttgacta 659
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 684 cccgttatatgcgcatggtgtggatcaactcaagggctgtgataaattggtttttgacta 743
Query: 660 tctgcagcagcactcggacacgtcagatgaaagtggaatacatgttgatgaactatctct 719
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 744 tctgcagcagcactcggacacgtcagatgaaagtggaatacatgttgatgaactatcttt 803
Query: 720 acagcttagacttccattggataagatcaggtcatcgctagaggttctcaaacaggaagg 779
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 804 acagcttagacttccattggataagatcaggtcatcgctagaggttctcaaacaggaagg 863
Query: 780 ttatgtatactccaccatcgatgaggatcatcacaagaaaacctga 825
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 864 ttatgtatactccaccatcgatgaggatcatcacaagaaaacctga 909
>gnl|LJGI|TC58053 similar to UniRef100_Q7XZT4 Cluster: RPA 32kDa; n=1; Pisum
sativum|Rep: RPA 32kDa - Pisum sativum (Garden pea),
partial (88%)
Length = 1109
Score = 238 bits (120), Expect = 4e-62
Identities = 306/368 (83%)
Strand = Plus / Plus
Query: 121 cagggtttggttccagtcacagtgaggcagataagtgaggcttctcactctggtgatgac 180
|||||||||||||| || ||||||| |||||| | ||| || ||||| |||||||||||
Sbjct: 157 cagggtttggttccggtgacagtgaagcagatcaatgaagcctctcagtctggtgatgaa 216
Query: 181 aagtccaatttcgtaatcaacggtgtcggtctcaccaatgtaaccttggttggaatggtg 240
||||| | |||||| ||||||||||| | ||||||||||| || ||||||||||||||
Sbjct: 217 aagtcaagtttcgtgatcaacggtgtagaactcaccaatgtgacgctggttggaatggtg 276
Query: 241 tttgagaaagttgagaaaaacactgaagttaactttgttttagatgatggaacaggaaga 300
|||||||||| |||| ||||||||| || || ||||||||||||||||| ||||| ||
Sbjct: 277 tttgagaaagcagagagaaacactgatgtcaattttgttttagatgatgggacagggcga 336
Query: 301 atcaaatgtaggagatgggtgaatgaaacttatgatacgaaggaaatggatcaaatacag 360
||||||||| | |||||| | ||||| ||| || || ||||| |||| ||||| |
Sbjct: 337 atcaaatgtcgaagatggatcaatgatgctttcgacacacaggaagtggaagaaataatg 396
Query: 361 gacggtatgtatgttcgcctttatggccatttgaagagctttcaaggtgtaaggcaactc 420
| |||||||||||||| || |||| |||||||| ||||| |||||||||||||| |
Sbjct: 397 aatggtatgtatgttcgtgttaatgggcatttgaaaagcttccaaggtgtaaggcaggtt 456
Query: 421 gttgccttctctgtgaggcctgtgacaaattttgatgagataccttttcacttcattgat 480
| ||||| ||||| ||||||||| |||||||||||||| ||||||||||||||||||
Sbjct: 457 gcagccttttctgtcaggcctgtggtgaattttgatgagatcccttttcacttcattgat 516
Query: 481 tgcataca 488
||||||||
Sbjct: 517 tgcataca 524
Score = 97.6 bits (49), Expect = 1e-19
Identities = 121/145 (83%)
Strand = Plus / Plus
Query: 614 atggtgtggatcaactcaagggctgtgataaattggtttttgactatctgcagcagcact 673
||||||||||| |||||||| ||||||||||||||| ||||||||||||||||||| |
Sbjct: 665 atggtgtggatggactcaaggattgtgataaattggttattgactatctgcagcagcatt 724
Query: 674 cggacacgtcagatgaaagtggaatacatgttgatgaactatctctacagcttagacttc 733
| |||| ||| ||||| | |||||||||| | | || ||||||| | |||| | ||||
Sbjct: 725 cagacatgtcggatgatcggggaatacatgctaacgagctatctcgagagctcaagcttc 784
Query: 734 cattggataagatcaggtcatcgct 758
||||||| ||||||| || ||||||
Sbjct: 785 cattggacaagatcatgttatcgct 809