Miyakogusa Predicted Gene

Lj1g3v1965120.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj1g3v1965120.1 tr|G7JCC2|G7JCC2_MEDTR Cryptochrome DASH
OS=Medicago truncatula GN=MTR_3g108710 PE=4
SV=1,67.95,0,CRYPTOCHROME,NULL; DNA_photolyase,DNA photolyase,
N-terminal; no description,Rossmann-like alpha/bet,CUFF.28199.1
         (801 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|BW595972 similar to UniRef100_A7P504 Cluster: Chromosom...   589   e-167

>gnl|LJGI|BW595972 similar to UniRef100_A7P504 Cluster: Chromosome chr4 scaffold_6,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr4 scaffold_6, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (5%)
          Length = 487

 Score =  589 bits (297), Expect = e-167
 Identities = 312/317 (98%)
 Strand = Plus / Plus

                                                                       
Query: 1   atggccattctccgctgcacattgacaccaacacttccatttctttctctgaaaaccacc 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 171 atggccattctccgctgcacattgacaccaacacttccatttctttctctgaaaaccacc 230

                                                                       
Query: 61  gtcaccgccgcacccaactccacgttaacattcctattacaaacacgaactcgcttcccc 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 231 gtcaccgccgcacccaactccacgttaacattcctattacaaacacgaactcgcttcccc 290

                                                                       
Query: 121 gcagccataacctccagttccgaaccagtgactcttcaccaggtgccagagcaagatgcc 180
           |||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 291 gcagccatgacctccagttccgaacccgtgactcttcaccaggtgccagagcaagatgcc 350

                                                                       
Query: 181 aacaataacatcatcgaccaaacatttcgaaagtacacctccaacaacgccaagaggagg 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| 
Sbjct: 351 aacaataacatcatcgaccaaacatttcgaaagtacacctccaacaacgccaagaggagt 410

                                                                       
Query: 241 ggaaaaggaaccgccattgtttggctcaggaacgatctcagagtgttggataatgaaact 300
           || ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 411 ggcaaaggaaccgccattgtttggttcaggaacgatctcagagtgttggataatgaaact 470

                            
Query: 301 ctttataaagcatgggt 317
           |||||||||||||||||
Sbjct: 471 ctttataaagcatgggt 487