Miyakogusa Predicted Gene
- Lj1g3v1965110.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj1g3v1965110.1 Non Chatacterized Hit- tr|Q681Z9|Q681Z9_ARATH
Putative uncharacterized protein At4g31090
OS=Arabidop,50,0.000000000001,coiled-coil,NULL; SUBFAMILY NOT
NAMED,NULL; FAMILY NOT NAMED,NULL; seg,NULL,CUFF.28266.1
(912 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC79253 similar to UniRef100_A7QQ43 Cluster: Chromosome... 1231 0.0
gnl|LJGI|TC77987 similar to UniRef100_A7QQ43 Cluster: Chromosome... 335 3e-91
>gnl|LJGI|TC79253 similar to UniRef100_A7QQ43 Cluster: Chromosome chr2 scaffold_140,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr2 scaffold_140, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (45%)
Length = 1107
Score = 1231 bits (621), Expect = 0.0
Identities = 624/625 (99%)
Strand = Plus / Plus
Query: 287 gttatgctattatgacaacaagatcagtggatatgaattggaaaatgagggcaatccggg 346
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gttatgctattatgacaacaagatcagtggatatgaattggaaaatgagggcaatccggg 60
Query: 347 ttttgcctatgtttcttttgcctgcactatcatctgctgcgtattcaggatttgtcagct 406
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 ttttgcctatgtttcttttgcctgcactatcatctgctgcgtattcaggatttgtcagct 120
Query: 407 tcaccaaaatttgtgatcgcagggaccagaaaattcttgataggcttcgagctgaaaggc 466
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 tcaccaaaatttgtgatcgcagggaccagaaaattcttgataggcttcgagctgaaaggc 180
Query: 467 aagcaaaaattgatgagctcaaagaaaagacaaattattactctacacaacagctcattc 526
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 aagcaaaaattgatgagctcaaagaaaagacaaattattactctacacaacagctcattc 240
Query: 527 agagatatgacactgacccagctgcaaaggcagctgctgcaactgttttggcatataagt 586
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 agagatatgacactgacccagctgcaaaggcagctgctgcaactgttttggcatataagt 300
Query: 587 tgggtgcagattctggtttgaaagtgcatatgggagatgaatccaaacccaattctgcaa 646
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 tgggtgcagattctggtttgaaagtgcatatgggagatgaatccaaacccaattctgcaa 360
Query: 647 cggggaagagcaatgatattgaacttgtgcagtctactggacttcgaaatcggaaacaag 706
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 361 cggggaagagcaatgatattgaacttgtgcagtctactggacatcgaaatcggaaacaag 420
Query: 707 ttcactctagtccagggacaaccacaacaaattttgatgagcaacaattagtagattctg 766
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 ttcactctagtccagggacaaccacaacaaattttgatgagcaacaattagtagattctg 480
Query: 767 gggggattgatcaaactcagacctctgagtacaatcagcttgttgttgttgaacatcaac 826
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 gggggattgatcaaactcagacctctgagtacaatcagcttgttgttgttgaacatcaac 540
Query: 827 atcctcaaagctccaccgcgcaagatggaggatggattgcacggattgcagcgttgcttg 886
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 atcctcaaagctccaccgcgcaagatggaggatggattgcacggattgcagcgttgcttg 600
Query: 887 tgggtgaggatccaactcagtctta 911
|||||||||||||||||||||||||
Sbjct: 601 tgggtgaggatccaactcagtctta 625
>gnl|LJGI|TC77987 similar to UniRef100_A7QQ43 Cluster: Chromosome chr2 scaffold_140,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr2 scaffold_140, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (35%)
Length = 792
Score = 335 bits (169), Expect = 3e-91
Identities = 309/353 (87%), Gaps = 2/353 (0%)
Strand = Plus / Plus
Query: 241 cgcaatcttattatattttctgttatatttgaggtcattgctgtaagttatgctattatg 300
||||| |||||| | ||||||||| ||||| |||||||||||||| |||||||| ||||
Sbjct: 388 cgcaaccttattctgttttctgttctatttcaggtcattgctgtagtttatgctactatg 447
Query: 301 acaacaagatcagtggatatgaattggaaaatgagggcaatccgggttttgcctatgttt 360
||||||||||| |||| ||||||||||||||||||||||||||| |||||||| ||||||
Sbjct: 448 acaacaagatccgtgggtatgaattggaaaatgagggcaatccgagttttgccaatgttt 507
Query: 361 cttttgcctgcactatcatctgctgcgtattcaggatttgtcagcttcaccaaaatttgt 420
||||||||||| ||||||||||||||||||| ||||||||||||| || |||
Sbjct: 508 cttttgcctgccttatcatctgctgcgtattccttctttgtcagcttcatacggatgtgt 567
Query: 421 gatcgcagggaccagaaaattcttgataggcttcgagctgaaaggcaagcaaaaattgat 480
|||||||||||||| |||| |||||| | || ||||||||||||| |||||||||||
Sbjct: 568 gatcgcagggaccaaaaaactcttgaaacactgagagctgaaaggcaggcaaaaattgac 627
Query: 481 gagctcaaagaaaagacaaattattactctacacaacagctcattcagagatatgacact 540
||||||||||| ||||||||||||||| ||| ||||| ||||||||||||||||||||
Sbjct: 628 gagctcaaagagaagacaaattattacattactcaacaactcattcagagatatgacacg 687
Query: 541 gacccagctgcaaaggcagctgctgcaactgttttggcatataagttgggtgc 593
|||||||| ||||| ||||||||||| |||| |||||||| ||||||||||||
Sbjct: 688 gacccagcagcaaa-gcagctgctgctactg-tttggcatctaagttgggtgc 738