Miyakogusa Predicted Gene
- Lj1g3v1943900.2
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj1g3v1943900.2 CUFF.28224.2
(2232 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|FS361548 similar to UniRef100_A7P540 Cluster: Chromosom... 450 e-125
gnl|LJGI|DC598338 147 3e-34
>gnl|LJGI|FS361548 similar to UniRef100_A7P540 Cluster: Chromosome chr4 scaffold_6,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr4 scaffold_6, whole genome shotgun sequence
- Vitis vinifera (Grape), partial (9%)
Length = 556
Score = 450 bits (227), Expect = e-125
Identities = 404/463 (87%)
Strand = Plus / Minus
Query: 1322 tcctccaaccacgcatatatttatctcctgcttctgtggactgccttcgtgttctagctt 1381
||||||| | ||||||||||| | |||||||| || ||||||| ||||||| |||||| |
Sbjct: 556 tcctccagcaacgcatatattcacctcctgctgctttggactgtcttcgtgctctagcat 497
Query: 1382 gtcgagtcctgcttggattagccagagatgatactattgcacacatattgacaaagcttc 1441
|||||||||||||||| ||||| |||||||||| ||| |||||||||||||||||||| |
Sbjct: 496 gtcgagtcctgcttggtttagcaagagatgatattatagcacacatattgacaaagctac 437
Query: 1442 aggttgggaaaaagctgtcagaactaattcgggattcaggcagcccgacacttggaaatg 1501
|||||||||| |||||||||||||||||| ||||||||||||| | ||||| ||||| |
Sbjct: 436 aggttgggaagaagctgtcagaactaattagggattcaggcagtcagacacatggaacag 377
Query: 1502 agcagggtaggtggcaagctgaactttcccaggctgcaattgagctaattgggattgtga 1561
||||||||||||||||||||||||||||||| |||||||| ||| |||||||| |||| |
Sbjct: 376 agcagggtaggtggcaagctgaactttcccaagctgcaatcgagttaattggggttgtca 317
Query: 1562 ctaatttagggtgtgcaagtacattagctgctactgatgcagctactcctacgttgaggc 1621
| || | |||| |||||||||||| |||||||| ||||||||||||||||| || ||||
Sbjct: 316 ccaactcagggcatgcaagtacattggctgctacagatgcagctactcctaccttaaggc 257
Query: 1622 gcatagaaagagcagctatagctgctgctactcctattacataccattcaagggaactct 1681
|||||||||||| ||||||||||||||| |||||||| ||||| |||| |||||||| |
Sbjct: 256 gcatagaaagagaagctatagctgctgccactcctatatcatacgattcgagggaacttt 197
Query: 1682 tgctcctggttcatgaacacctacaggcatttggattagcacaaactgcttctacattgc 1741
| | || |||||||| || ||| |||| |||||| ||||||||||||||| |||||
Sbjct: 196 tacaacttattcatgaatacgtacgagcatctggattgtcacaaactgcttctatattgc 137
Query: 1742 ttaaagaggctcagttgactcctttgccatcattgatttctcc 1784
|||||||||||||||||| ||||||||||||| |||| ||||
Sbjct: 136 ttaaagaggctcagttgaaacctttgccatcatcgattgctcc 94
>gnl|LJGI|DC598338
Length = 180
Score = 147 bits (74), Expect = 3e-34
Identities = 77/78 (98%)
Strand = Plus / Plus
Query: 2055 tgggagagagccttcagatactagtatagtagagactccgtctgaatctgcggtgaaaca 2114
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 103 tgggagagagccttcacatactagtatagtagagactccgtctgaatctgcggtgaaaca 162
Query: 2115 taacattgatgctggatc 2132
||||||||||||||||||
Sbjct: 163 taacattgatgctggatc 180
Score = 95.6 bits (48), Expect = 1e-18
Identities = 48/48 (100%)
Strand = Plus / Minus
Query: 1993 tcccattcaaaacaccaacctgttgactctcagcacacatcggtcaga 2040
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 107 tcccattcaaaacaccaacctgttgactctcagcacacatcggtcaga 60
Score = 81.8 bits (41), Expect = 2e-14
Identities = 44/45 (97%)
Strand = Plus / Plus
Query: 1978 tcatcatcttttggttcccattcaaaacaccaacctgttgactct 2022
||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 18 tcatcatcttttggttcgcattcaaaacaccaacctgttgactct 62