Miyakogusa Predicted Gene

Lj1g3v1943860.2
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj1g3v1943860.2 Non Chatacterized Hit- tr|I1HCP4|I1HCP4_BRADI
Uncharacterized protein OS=Brachypodium distachyon
GN=,41.07,0.000000000000003,FAMILY NOT NAMED,NULL,CUFF.28185.2
         (576 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|FS320602 similar to UniRef100_A7P5I9 Cluster: Chromosom...   557   e-158

>gnl|LJGI|FS320602 similar to UniRef100_A7P5I9 Cluster: Chromosome chr4 scaffold_6,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr4 scaffold_6, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (36%)
          Length = 723

 Score =  557 bits (281), Expect = e-158
 Identities = 281/281 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgccacctgtgagtaaaacattggatgattctgataaatgggtgaccgtactctgtacg 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 443 atgccacctgtgagtaaaacattggatgattctgataaatgggtgaccgtactctgtacg 502

                                                                       
Query: 61  aagctgacaatgtggtggccttgggttgctgagggggagattccacttaaacaatctaaa 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 503 aagctgacaatgtggtggccttgggttgctgagggggagattccacttaaacaatctaaa 562

                                                                       
Query: 121 ggagaggagatatccaagtacaaggaacttgatccatcagatcgtttactgctgctaaaa 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 563 ggagaggagatatccaagtacaaggaacttgatccatcagatcgtttactgctgctaaaa 622

                                                                       
Query: 181 gcactttgtgaagttagagctgaccaacacgatgcagtgtcatacattaatgacgcctta 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 623 gcactttgtgaagttagagctgaccaacacgatgcagtgtcatacattaatgacgcctta 682

                                                    
Query: 241 aaagaaggaacccaagtttcttcttttcgcaaagatgcctt 281
           |||||||||||||||||||||||||||||||||||||||||
Sbjct: 683 aaagaaggaacccaagtttcttcttttcgcaaagatgcctt 723