Miyakogusa Predicted Gene
- Lj1g3v1932790.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj1g3v1932790.1 tr|G7JC98|G7JC98_MEDTR Potassium channel
OS=Medicago truncatula GN=MTR_3g108320 PE=4 SV=1,79.04,0,CYCLIC
NUCLEOTIDE GATED CHANNEL,NULL; VOLTAGE AND LIGAND GATED POTASSIUM
CHANNEL,NULL; CNMP_BINDING_,CUFF.28192.1
(1872 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC67214 weakly similar to UniRef100_A7P5I7 Cluster: Chr... 1786 0.0
gnl|LJGI|TC62189 weakly similar to UniRef100_A7P5I7 Cluster: Chr... 1511 0.0
gnl|LJGI|BP084167 similar to UniRef100_A7P5I7 Cluster: Chromosom... 214 1e-54
>gnl|LJGI|TC67214 weakly similar to UniRef100_A7P5I7 Cluster: Chromosome chr4
scaffold_6, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr4 scaffold_6, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (39%)
Length = 1111
Score = 1786 bits (901), Expect = 0.0
Identities = 901/901 (100%)
Strand = Plus / Plus
Query: 972 gaaggagcaaatgttggcacacacacaattgaagttcaagacagcagagttacagcaaga 1031
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2 gaaggagcaaatgttggcacacacacaattgaagttcaagacagcagagttacagcaaga 61
Query: 1032 acaagtgctacaagacctgcctaaagcaattagagccggcattgctcagcatcttttccg 1091
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 62 acaagtgctacaagacctgcctaaagcaattagagccggcattgctcagcatcttttccg 121
Query: 1092 caatgtagttgaaaatgcatatttatttaaaggagtttctaatgattttatcacactgct 1151
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122 caatgtagttgaaaatgcatatttatttaaaggagtttctaatgattttatcacactgct 181
Query: 1152 ggtaacagaaatgaaagtagaatactacccatctaaggttgacataatcttgcaaaatga 1211
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 182 ggtaacagaaatgaaagtagaatactacccatctaaggttgacataatcttgcaaaatga 241
Query: 1212 gatgccagcatatttctacattttggtgtctggatcagtggatgtgttgatatacaagaa 1271
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 242 gatgccagcatatttctacattttggtgtctggatcagtggatgtgttgatatacaagaa 301
Query: 1272 tgggtctgaaaagttcttgcacaaactagaaccaggaagcacggcaggagaaatcggcgt 1331
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 302 tgggtctgaaaagttcttgcacaaactagaaccaggaagcacggcaggagaaatcggcgt 361
Query: 1332 gatgtttaatagtccacaaccttatacagtgagaagtagaaggctctcccaggttatacg 1391
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 362 gatgtttaatagtccacaaccttatacagtgagaagtagaaggctctcccaggttatacg 421
Query: 1392 aatcaatcatcaccatttcaagcagatggtgcagccattcagtgacgatgggaaggcaat 1451
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 422 aatcaatcatcaccatttcaagcagatggtgcagccattcagtgacgatgggaaggcaat 481
Query: 1452 catcaacaacttcattcagtttatgaaaggtctaaaaagagacgtgctagaagaaatacc 1511
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 482 catcaacaacttcattcagtttatgaaaggtctaaaaagagacgtgctagaagaaatacc 541
Query: 1512 atgcgtaacagaattgctgggtgacctgaatgatgagcatctaacacaaacgcagggcac 1571
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 542 atgcgtaacagaattgctgggtgacctgaatgatgagcatctaacacaaacgcagggcac 601
Query: 1572 acacaatgaagttagaagtcatgaagatgatccatatgaagaagggagaacagaaagttc 1631
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 602 acacaatgaagttagaagtcatgaagatgatccatatgaagaagggagaacagaaagttc 661
Query: 1632 caatccacagtcaagcccagtccccatcagagtcaaaatctacggacatcgtcccaatga 1691
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 662 caatccacagtcaagcccagtccccatcagagtcaaaatctacggacatcgtcccaatga 721
Query: 1692 aaacgaaatgggaaacggaacaacaccgaagctcatacttctcccaaattcactcgagga 1751
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 722 aaacgaaatgggaaacggaacaacaccgaagctcatacttctcccaaattcactcgagga 781
Query: 1752 tcttttcagagtcgcagagaaaaagtttggaaaacgcggaagcaaaattgttatggctga 1811
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 782 tcttttcagagtcgcagagaaaaagtttggaaaacgcggaagcaaaattgttatggctga 841
Query: 1812 tggctcagaagtagaagaactaagcgccttaagagagaacgatgaattatatatcatcta 1871
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 842 tggctcagaagtagaagaactaagcgccttaagagagaacgatgaattatatatcatcta 901
Query: 1872 a 1872
|
Sbjct: 902 a 902
>gnl|LJGI|TC62189 weakly similar to UniRef100_A7P5I7 Cluster: Chromosome chr4
scaffold_6, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr4 scaffold_6, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (40%)
Length = 810
Score = 1511 bits (762), Expect = 0.0
Identities = 765/766 (99%)
Strand = Plus / Plus
Query: 1 atgtcattgccatctctagttagaagacgttcaactgcggaaataaggaacttggtcgca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 45 atgtcattgccatctctagttagaagacgttcaactgcggaaataaggaacttggtcgca 104
Query: 61 gtttccagcagcctcttaccagcatttggcaccgttttgaatgaaggtaacacgaatcta 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 105 gtttccagcagcctcttaccagcatttggcaccgttttgaatgaaggtaacacgaatcta 164
Query: 121 agaaaacatgtcatcgctccctatgaccgaagatataggttgtggcaaatgttcctagtg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 165 agaaaacatgtcatcgctccctatgaccgaagatataggttgtggcaaatgttcctagtg 224
Query: 181 gtattggtggtttattcagcctgggcttctgcatttgagctagctttcagaacactgtca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 225 gtattggtggtttattcagcctgggcttctgcatttgagctagctttcagaacactgtca 284
Query: 241 gttgggtcattgttggtggttgatctagttgtggatgtgttctttgcaattgatatagtt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 285 gttgggtcattgttggtggttgatctagttgtggatgtgttctttgcaattgatatagtt 344
Query: 301 ctaactttcttcgtggcttacttggatacttcaacttatttccttgttgatgaccataag 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 345 ctaactttcttcgtggcttacttggatacttcaacttatttccttgttgatgaccataag 404
Query: 361 aagattgctattaggtacgtcaagaagttacactttgccatggacctggcttctactgtg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 405 aagattgctattaggtacgtcaagaagttacactttgccatggacctggcttctactgtg 464
Query: 421 ccaattcagcagatataccaacttctggcaggtaaatcacacggaaatgagttctttggt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 465 ccaattcagcagatataccaacttctggcaggtaaatcacacggaaatgagttctttggt 524
Query: 481 ttcctgaatttgcttagactctggcgattaaggcgtgttagcgaactcttcacgaggcta 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 525 ttcctgaatttgcttagactctggcgattaaggcgtgttagcgaactcttcacgaggcta 584
Query: 541 gagaaagacatacgagttagctactcggtaacaagattttttaagcttgtatgcgttacg 600
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 585 gagaaagacatacgagttagctactcggtaacaagattttttaagcttgtatacgttacg 644
Query: 601 ctatgtgcagtgcacttcgcaggctgcacgtatttctggttggcggtacatcataaaaat 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 645 ctatgtgcagtgcacttcgcaggctgcacgtatttctggttggcggtacatcataaaaat 704
Query: 661 cctgaaaacacatggatcgggaagcaaatggaggattttaaacatagaagtgtctggttg 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 705 cctgaaaacacatggatcgggaagcaaatggaggattttaaacatagaagtgtctggttg 764
Query: 721 ggttacacttattccatgtactggtcaatggtcactcttagcactg 766
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 765 ggttacacttattccatgtactggtcaatggtcactcttagcactg 810
>gnl|LJGI|BP084167 similar to UniRef100_A7P5I7 Cluster: Chromosome chr4 scaffold_6,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr4 scaffold_6, whole genome shotgun sequence
- Vitis vinifera (Grape), partial (5%)
Length = 353
Score = 214 bits (108), Expect = 1e-54
Identities = 108/108 (100%)
Strand = Plus / Minus
Query: 1765 gcagagaaaaagtttggaaaacgcggaagcaaaattgttatggctgatggctcagaagta 1824
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 219 gcagagaaaaagtttggaaaacgcggaagcaaaattgttatggctgatggctcagaagta 160
Query: 1825 gaagaactaagcgccttaagagagaacgatgaattatatatcatctaa 1872
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 159 gaagaactaagcgccttaagagagaacgatgaattatatatcatctaa 112