Miyakogusa Predicted Gene
- Lj1g3v1931430.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj1g3v1931430.1 Non Chatacterized Hit- tr|I3SC69|I3SC69_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2 SV=1,98.84,0,SYNTAXIN
5,NULL; SYNTAXIN,NULL; no description,NULL; SNARE,Target SNARE
coiled-coil domain; Syntaxin,CUFF.28213.1
(1038 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC60716 similar to UniRef100_A7P5H6 Cluster: Chromosome... 1927 0.0
gnl|LJGI|TC59354 similar to UniRef100_A7PEU9 Cluster: Chromosome... 632 e-180
gnl|LJGI|TC67676 similar to UniRef100_A7PEU9 Cluster: Chromosome... 436 e-121
gnl|LJGI|TC82774 similar to UniRef100_Q9FUY2 Cluster: Transcript... 54 2e-06
gnl|LJGI|TC79997 similar to UniRef100_A7P6S1 Cluster: Chromosome... 54 2e-06
>gnl|LJGI|TC60716 similar to UniRef100_A7P5H6 Cluster: Chromosome chr4 scaffold_6,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr4 scaffold_6, whole genome shotgun sequence
- Vitis vinifera (Grape), partial (78%)
Length = 1572
Score = 1927 bits (972), Expect = 0.0
Identities = 981/984 (99%)
Strand = Plus / Plus
Query: 1 atgaaatcggcacagtcctcattccgagatcggacacacgaattccaaaacattgcagag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 165 atgaaatcggcacagtcctcattccgagatcggacacacgaattccaaaacattgcagag 224
Query: 61 aggttgaagaaatcaggatctggacccaatggacctgccaccaccaccaccgccaccgcc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 225 aggttgaagaaatcaggatctggacccaatggacctgccaccaccaccaccgccaccgcc 284
Query: 121 tcctcatccagatcggaggaacaccgttccgctgttgctatgcaatcagaattcaacaaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 285 tcctcatccagatcggaggaacaccgttccgctgttgctatgcaatcagaattcaacaaa 344
Query: 181 agagcttccaaaatcggctacgggattcaccaaacctctcagaagctctccaagctcgca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 345 agagcttccaaaatcggctacgggattcaccaaacctctcagaagctctccaagctcgca 404
Query: 241 aaactggcgaaacggacttcggtttttgatgaccctaccatggaaatccaagagcttact 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 405 aaactggcgaaacggacttcggtttttgatgaccctaccatggaaatccaagagcttact 464
Query: 301 agtgttatcaagcaagatattactgcgctgaactctgcggttgttgatcttcaattggtt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 465 agtgttatcaagcaagatattactgcgctgaactctgcggttgttgatcttcaattggtt 524
Query: 361 agcaattctaggaatgagagtggaaacgcttcggccgacacgactagccattcgttcacg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 525 agcaattctaggaatgagagtggaaacgcttcggccgacacgactagccattcgttcacg 584
Query: 421 gtggtggatgacctcaagacgcggttgatgagcaccaccaaggagtttaaagatgttctc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 585 gtggtggatgacctcaagacgcggttgatgagcaccaccaaggagtttaaagatgttctc 644
Query: 481 accatgagaactgagaacttgaaagtacatgagaatagaagacaactgttttcgtcctct 540
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 645 accatgagaactgagaacttgagagtacatgagaatagaagacaactgttttcgtcctct 704
Query: 541 gcttccaaggaatctgcaaatcctttcgtccgtcagcggccgttagctacgagaacggct 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 705 gcttccaaggaatctgcaaatcctttcgtccgtcagcggccgttagctacgagaacggct 764
Query: 601 gctagtgaatctaatgctcctgcacccccatgggctagtgggctggggtcctcgtcgtct 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 765 gctagtgaatctaatgctcctgcacccccatgggctagtgggctggggtcctcgtcgtct 824
Query: 661 tctcagttgtttcctaagaagcaggttgatggggagagtcaaccgttgctgcaacaacaa 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 825 tctcagttgtttcctaagaagcaggttgatggggagagtcaaccgttgctgcaacaacaa 884
Query: 721 caacagcaacagcagcagcagttagtcccactgcaagacagttacatgcaaagcagagct 780
|||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 885 caacagtaacagcagcagcagttagtcccactgcaagacggttacatgcaaagcagagct 944
Query: 781 gaggctcttcagaatgttgagtccactattcatgagctcagcaacatctttaatcaacta 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 945 gaggctcttcagaatgttgagtccactattcatgagctcagcaacatctttaatcaacta 1004
Query: 841 gcaacacttgtttcccaacaaggagaagttgccatcaggattgatgaaaacatggatgat 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1005 gcaacacttgtttcccaacaaggagaagttgccatcaggattgatgaaaacatggatgat 1064
Query: 901 acattggcaaacgtagaaggggcacaaggtgctttgttgaagtatatgaacagcatatct 960
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1065 acattggcaaacgtagaaggggcacaaggtgctttgttgaagtatatgaacagcatatct 1124
Query: 961 tctaataggtggctgatgatcaag 984
||||||||||||||||||||||||
Sbjct: 1125 tctaataggtggctgatgatcaag 1148
>gnl|LJGI|TC59354 similar to UniRef100_A7PEU9 Cluster: Chromosome chr11 scaffold_13,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr11 scaffold_13, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (51%)
Length = 753
Score = 632 bits (319), Expect = e-180
Identities = 492/551 (89%), Gaps = 9/551 (1%)
Strand = Plus / Plus
Query: 28 gatcggacacacgaattccaaaacattgcagagaggttgaagaaatcaggatctggaccc 87
|||||||| ||||||||||| | ||| ||||||||||||||||||||||||||||||||
Sbjct: 206 gatcggacgcacgaattccacagcatcacagagaggttgaagaaatcaggatctggaccc 265
Query: 88 aatggacctgccaccaccaccaccgccaccgcctcctcatccagatcggaggaacaccgt 147
|||||||||||||||||||||||| || ||||||||||||||||||| ||||
Sbjct: 266 aatggacctgccaccaccaccaccacc---------tcatccagatcggaggaaccccgt 316
Query: 148 tccgctgttgctatgcaatcagaattcaacaaaagagcttccaaaatcggctacgggatt 207
|| || ||||||||||||||||||||||||||||||| ||||||||||| ||||| |||
Sbjct: 317 tctgccattgctatgcaatcagaattcaacaaaagagcctccaaaatcggttacggcatt 376
Query: 208 caccaaacctctcagaagctctccaagctcgcaaaactggcgaaacggacttcggttttt 267
||||||||||||||||||||| |||||||||||||| |||||||| |||||||||||||
Sbjct: 377 caccaaacctctcagaagctcgccaagctcgcaaaattggcgaaaaggacttcggttttc 436
Query: 268 gatgaccctaccatggaaatccaagagcttactagtgttatcaagcaagatattactgcg 327
||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||
Sbjct: 437 gatgaccctaccatggaaatccaagagcttactagtgttattaagcaggatattactgcg 496
Query: 328 ctgaactctgcggttgttgatcttcaattggttagcaattctaggaatgagagtggaaac 387
|| ||||| ||||||||||||||||| || | ||||||||||||||||||||||||||
Sbjct: 497 ctaaactccgcggttgttgatcttcagttactcagcaattctaggaatgagagtggaaat 556
Query: 388 gcttcggccgacacgactagccattcgttcacggtggtggatgacctcaagacgcggttg 447
||||| |||||||||||||| ||||| |||||| || |||||||||||||||||||||
Sbjct: 557 gcttctgccgacacgactagtcattccaccacggttgtagatgacctcaagacgcggttg 616
Query: 448 atgagcaccaccaaggagtttaaagatgttctcaccatgagaactgagaacttgaaagta 507
||| | |||| ||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 617 atgggtgccacgaaggagtttaaagatgttctcaccatgagaactgagaacatgaaagta 676
Query: 508 catgagaatagaagacaactgttttcgtcctctgcttccaaggaatctgcaaatcctttc 567
|| |||| ||| |||||| |||||||| ||||||| || || || ||||| || |||||
Sbjct: 677 cacgagagtaggagacaattgttttcggcctctgcctcgaaagattctgctaaccctttt 736
Query: 568 gtccgtcagcg 578
|||||||||||
Sbjct: 737 gtccgtcagcg 747
>gnl|LJGI|TC67676 similar to UniRef100_A7PEU9 Cluster: Chromosome chr11 scaffold_13,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr11 scaffold_13, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (44%)
Length = 639
Score = 436 bits (220), Expect = e-121
Identities = 300/327 (91%), Gaps = 6/327 (1%)
Strand = Plus / Plus
Query: 664 cagttgtttcctaagaagcaggttgatggggagagtcaaccgttgctgcaaca------a 717
|||||||||||||||||||| || ||||||||||||||||| ||| ||||||| |
Sbjct: 103 cagttgtttcctaagaagcaagtggatggggagagtcaaccattgttgcaacagcagcaa 162
Query: 718 caacaacagcaacagcagcagcagttagtcccactgcaagacagttacatgcaaagcaga 777
|||||||||||||||||||| ||| |||| || | |||||||||||||||| |||||||
Sbjct: 163 caacaacagcaacagcagcaacagatagttcctttacaagacagttacatgccaagcaga 222
Query: 778 gctgaggctcttcagaatgttgagtccactattcatgagctcagcaacatctttaatcaa 837
|| || || ||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 223 gcagaagcacttcagaatgttgagtccactattcatgagctcagcaacatttttaatcaa 282
Query: 838 ctagcaacacttgtttcccaacaaggagaagttgccatcaggattgatgaaaacatggat 897
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 283 ctagcaacacttgtttcccaacaaggagaggttgccatcaggattgatgaaaacatggat 342
Query: 898 gatacattggcaaacgtagaaggggcacaaggtgctttgttgaagtatatgaacagcata 957
||||||||||||||||| || ||||| ||||||||||||||||||||| |||||||||||
Sbjct: 343 gatacattggcaaacgtggagggggcgcaaggtgctttgttgaagtatctgaacagcata 402
Query: 958 tcttctaataggtggctgatgatcaag 984
||||||||||||||||| |||||||||
Sbjct: 403 tcttctaataggtggctcatgatcaag 429
>gnl|LJGI|TC82774 similar to UniRef100_Q9FUY2 Cluster: Transcriptional corepressor
LEUNIG; n=1; Arabidopsis thaliana|Rep: Transcriptional
corepressor LEUNIG - Arabidopsis thaliana (Mouse-ear
cress), partial (17%)
Length = 618
Score = 54.0 bits (27), Expect = 2e-06
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 711 gcaacaacaacaacagcaacagcagcagcag 741
|||||||||||| ||||||||||||||||||
Sbjct: 360 gcaacaacaacagcagcaacagcagcagcag 390
>gnl|LJGI|TC79997 similar to UniRef100_A7P6S1 Cluster: Chromosome chr9 scaffold_7,
whole genome shotgun sequence; n=2; Vitis vinifera|Rep:
Chromosome chr9 scaffold_7, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (79%)
Length = 1145
Score = 54.0 bits (27), Expect = 2e-06
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 715 caacaacaacagcaacagcagcagcag 741
|||||||||||||||||||||||||||
Sbjct: 224 caacaacaacagcaacagcagcagcag 250