Miyakogusa Predicted Gene

Lj1g3v1915000.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj1g3v1915000.1 Non Chatacterized Hit- tr|I1JUH0|I1JUH0_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.36435
PE,62.65,0.00000000001,seg,NULL,BW626526.path1.1
         (249 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|BW626526                                                     470   e-132
gnl|LJGI|TC78667 similar to UniRef100_A7P5L0 Cluster: Chromosome...   131   2e-30

>gnl|LJGI|BW626526 
          Length = 466

 Score =  470 bits (237), Expect = e-132
 Identities = 246/249 (98%)
 Strand = Plus / Plus

                                                                       
Query: 1   atggaagaaagtgaaggtgtgaattgttttagtgaaagcagaagctccagtgagagtcga 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 217 atggaagaaagtgaaggtgtgaattgttttagtgaaagcagaagctccagtgagagtcga 276

                                                                       
Query: 61  cctccgaatccaaatcccaatccttcgattgcttctgcttatcgccaatgccagcgttct 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 277 cctccgaatccaaatcccaatccttcgattgcttctgcttatcgccaatgccagcgttct 336

                                                                       
Query: 121 gaccctgcggttttgcattgcaggaaatcgcttgttcgccatgcttctcttacaacaatc 180
           |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 337 gaccctgcggttttgcattgcaggaaatcgcttgttcgccgtgcttctcttacaacaatc 396

                                                                       
Query: 181 aagctttctgaggtatgctctgagccagggaatgttactgaagattgccagtctgatttc 240
           ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 397 aagctttctgaggtatgctctgagccagggaatgttactgaagattgtcagtctgatttc 456

                    
Query: 241 cttacaaag 249
           ||| |||||
Sbjct: 457 cttccaaag 465


>gnl|LJGI|TC78667 similar to UniRef100_A7P5L0 Cluster: Chromosome chr4 scaffold_6,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr4 scaffold_6, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (78%)
          Length = 1216

 Score =  131 bits (66), Expect = 2e-30
 Identities = 75/78 (96%)
 Strand = Plus / Plus

                                                                       
Query: 172 acaacaatcaagctttctgaggtatgctctgagccagggaatgttactgaagattgccag 231
           ||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||
Sbjct: 44  acaacaatcaagctttctgaggtgtgctctgagccagggaatgttactgaagattgtcag 103

                             
Query: 232 tctgatttccttacaaag 249
           |||||||||||| |||||
Sbjct: 104 tctgatttccttccaaag 121