Miyakogusa Predicted Gene
- Lj1g3v1914990.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj1g3v1914990.1 tr|G7JBP0|G7JBP0_MEDTR Pleiotropic drug
resistance protein OS=Medicago truncatula GN=MTR_3g107870
PE,87.37,0,P-loop containing nucleoside triphosphate hydrolases,NULL;
ABC2_membrane,ABC-2 type transporter; PDR,CUFF.28151.1
(3837 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC80210 weakly similar to UniRef100_A7P5L9 Cluster: Chr... 218 2e-55
gnl|LJGI|BP055095 similar to UniRef100_A7PQG8 Cluster: Chromosom... 111 3e-23
gnl|LJGI|TC75444 similar to UniRef100_Q1M2R7 Cluster: PDR-like A... 109 1e-22
gnl|LJGI|DC598342 homologue to UniRef100_A7P745 Cluster: Chromos... 100 1e-19
gnl|LJGI|GO024126 similar to UniRef100_A7P7K4 Cluster: Chromosom... 92 3e-17
gnl|LJGI|TC81588 similar to UniRef100_A7R926 Cluster: Chromosome... 92 3e-17
gnl|LJGI|BW623406 similar to UniRef100_A7P745 Cluster: Chromosom... 76 2e-12
gnl|LJGI|FS343429 similar to UniRef100_Q1M2R7 Cluster: PDR-like ... 72 3e-11
gnl|LJGI|TC80251 72 3e-11
gnl|LJGI|AI967680 similar to UniRef100_Q9XIE2 Cluster: Pleiotrop... 64 7e-09
gnl|LJGI|TC79697 similar to UniRef100_A7R926 Cluster: Chromosome... 60 1e-07
gnl|LJGI|AV406931 similar to UniRef100_A7P7M5 Cluster: Chromosom... 58 4e-07
>gnl|LJGI|TC80210 weakly similar to UniRef100_A7P5L9 Cluster: Chromosome chr4
scaffold_6, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr4 scaffold_6, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (10%)
Length = 959
Score = 218 bits (110), Expect = 2e-55
Identities = 176/198 (88%)
Strand = Plus / Plus
Query: 3221 tacttctcttgaagcgtggaggtgaggaaatatatgttgggcctttaggcctgcaatgtt 3280
||||| ||||||||| | |||||||| |||||||| | ||||||||||| ||| ||||
Sbjct: 237 tacttatcttgaagcatagaggtgagaaaatatatatggggcctttaggatggcagtgtt 296
Query: 3281 cacatctgatcaattactttgagggaatcaatggagtgccaaaaattaagaatggttata 3340
| ||||||||||||||||| |||||||| ||||||||||||||| ||||||||| ||||
Sbjct: 297 ctcatctgatcaattacttggagggaattaatggagtgccaaaacttaagaatgattatg 356
Query: 3341 atcctgccacatggatgttggaggttacttcagaagcacaagaagcagctcttggagtta 3400
|||||||||| ||||||||||||||||||| | |||||||||||||||||||||||||||
Sbjct: 357 atcctgccacttggatgttggaggttactttacaagcacaagaagcagctcttggagtta 416
Query: 3401 acttcgctgaaacataca 3418
|||| | ||||| |||||
Sbjct: 417 actttgatgaaatataca 434
>gnl|LJGI|BP055095 similar to UniRef100_A7PQG8 Cluster: Chromosome chr6 scaffold_25,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr6 scaffold_25, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (12%)
Length = 538
Score = 111 bits (56), Expect = 3e-23
Identities = 284/360 (78%)
Strand = Plus / Plus
Query: 976 ggacaaaagaagagagtcacaactggtgagatgctagttggaccagcaagagcccttttc 1035
||||| ||||||||||| ||||| ||||||||||| || ||||| |||| || || |||
Sbjct: 111 ggacagaagaagagagtaacaacaggtgagatgctggtaggacctgcaaaggcactcttc 170
Query: 1036 atggatgaaatatcaactggtttggacagttctaccacattccaaatgatcaattccctg 1095
||||||||||||||||| || ||||||||||| ||||| ||||| || ||| | | ||
Sbjct: 171 atggatgaaatatcaacaggattggacagttccaccaccttccagatatgcaagttcatg 230
Query: 1096 agacaatccatccacattctgaatggaacagctgtcatctctcttctccagccagcacca 1155
|||||| | || || || ||| ||| || || |||||| | ||||||||||||
Sbjct: 231 agacaaatggttcatatcatggatgtaaccatggtgatttctcttttacagccagcacca 290
Query: 1156 gaaacttttgagttatttgatgatatcattctcctctctgatggacaaattgtctaccaa 1215
|| || ||||| | || || || || || || || || || || |||||||| ||||||
Sbjct: 291 gagacatttgaactcttcgacgacattatcctgctttcagaaggtcaaattgtataccaa 350
Query: 1216 ggtccaagggaaaatgtgcttgagttctttgaaaacatgggctttaagtgtcctgagaga 1275
|||||| | || || ||||| ||||| ||||| ||||||| || ||||||||||| |||
Sbjct: 351 ggtccacgagagaacgtgctagagttttttgagtacatgggtttcaagtgtcctgaaaga 410
Query: 1276 aaaggagtagcagattttttacaagaagtaacatcaagaaaagatcaagaacaatattgg 1335
||||||| || || ||| |||||||||||||||| | ||||| || ||||||||||||
Sbjct: 411 aaaggagctgctgactttctacaagaagtaacatccaagaaagaccaggaacaatattgg 470
>gnl|LJGI|TC75444 similar to UniRef100_Q1M2R7 Cluster: PDR-like ABC-transporter; n=1;
Glycine max|Rep: PDR-like ABC-transporter - Glycine max
(Soybean), partial (22%)
Length = 1248
Score = 109 bits (55), Expect = 1e-22
Identities = 133/159 (83%)
Strand = Plus / Plus
Query: 3674 aacaagatctatttaatgctatgggatcaatgtatgcttcaatcctcttcattggggtac 3733
||||||||||||||||| | ||||| || ||||||||| | | || |||||||| ||
Sbjct: 284 aacaagatctatttaattccatggggtccatgtatgctgctgttcttttcattggcgtca 343
Query: 3734 aaaatgctacaactgtgcaaccagttgtagccattgagagaacagttttttatagagaaa 3793
| ||||||| | ||||| ||||| || || ||||||||||||| |||||||||||||
Sbjct: 344 agaatgctaatgcagtgcagccagtggttgctgttgagagaacagtcttttatagagaaa 403
Query: 3794 gagctgctggaatgtactcagctttgccatatgcatttg 3832
|||||||||||||||| ||||||||| ||||||| ||||
Sbjct: 404 gagctgctggaatgtattcagctttggcatatgcttttg 442
>gnl|LJGI|DC598342 homologue to UniRef100_A7P745 Cluster: Chromosome chr9 scaffold_7,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr9 scaffold_7, whole genome shotgun sequence
- Vitis vinifera (Grape), partial (33%)
Length = 553
Score = 99.6 bits (50), Expect = 1e-19
Identities = 140/170 (82%)
Strand = Plus / Plus
Query: 3052 cttgttgccaatccttctattatattcatggatgaacctacctctggccttgatgccaga 3111
||||| || |||||||| || || |||||||||||||| || || ||||| ||||| |||
Sbjct: 276 cttgtcgcgaatccttcaatcattttcatggatgaaccaacttcaggcctcgatgcaaga 335
Query: 3112 gctgctgctatagtgatgaggactgtgaggaatacagtagatacagggaggacagtggtc 3171
|| || || || || |||||||| ||||| || || || || || || |||||||| |||
Sbjct: 336 gcagcagccattgttatgaggacagtgagaaacactgttgacactggaaggacagttgtc 395
Query: 3172 tgcacaatccaccagcctagcattgatatatttgatgcttttgatgagct 3221
|||||||| ||||| ||||| |||||||| ||||| || |||||||||||
Sbjct: 396 tgcacaattcaccaacctagtattgatatctttgaagcctttgatgagct 445
>gnl|LJGI|GO024126 similar to UniRef100_A7P7K4 Cluster: Chromosome chr9 scaffold_7,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr9 scaffold_7, whole genome shotgun sequence
- Vitis vinifera (Grape), partial (16%)
Length = 723
Score = 91.7 bits (46), Expect = 3e-17
Identities = 133/162 (82%)
Strand = Plus / Plus
Query: 3676 caagatctatttaatgctatgggatcaatgtatgcttcaatcctcttcattggggtacaa 3735
|||||||| || ||||| ||||| |||||||||||| || | ||||||||| || |||
Sbjct: 118 caagatcttttcaatgcaatgggttcaatgtatgctgcagttaccttcattggagttcaa 177
Query: 3736 aatgctacaactgtgcaaccagttgtagccattgagagaacagttttttatagagaaaga 3795
|||| | | | ||||| ||| | |||| ||||||||||||| || || |||||||||
Sbjct: 178 aatggtgcctcagtgcagccaatcatagcagttgagagaacagtcttctacagagaaaga 237
Query: 3796 gctgctggaatgtactcagctttgccatatgcatttggacag 3837
|||||||||||||| |||||||||||||| || |||| ||||
Sbjct: 238 gctgctggaatgtattcagctttgccatacgcttttgcacag 279
>gnl|LJGI|TC81588 similar to UniRef100_A7R926 Cluster: Chromosome undetermined
scaffold_3238, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_3238,
whole genome shotgun sequence - Vitis vinifera (Grape),
partial (51%)
Length = 715
Score = 91.7 bits (46), Expect = 3e-17
Identities = 94/110 (85%)
Strand = Plus / Plus
Query: 3154 acagggaggacagtggtctgcacaatccaccagcctagcattgatatatttgatgctttt 3213
||||| || ||||| || ||||| |||||||| ||||||||||| || ||||| ||||||
Sbjct: 32 acaggaagaacagttgtatgcaccatccaccaacctagcattgacatttttgaagctttt 91
Query: 3214 gatgagctacttctcttgaagcgtggaggtgaggaaatatatgttgggcc 3263
||||||||| | || ||||||||||||| | |||||||||||||||||
Sbjct: 92 gatgagctattcctaatgaagcgtggaggacaagaaatatatgttgggcc 141
Score = 60.0 bits (30), Expect = 1e-07
Identities = 57/66 (86%)
Strand = Plus / Plus
Query: 3767 ttgagagaacagttttttatagagaaagagctgctggaatgtactcagctttgccatatg 3826
|||| |||||||| || |||||||||| ||||||||||||||| || || || || ||||
Sbjct: 645 ttgaaagaacagtcttctatagagaaaaagctgctggaatgtattctgccttaccctatg 704
Query: 3827 catttg 3832
||||||
Sbjct: 705 catttg 710
>gnl|LJGI|BW623406 similar to UniRef100_A7P745 Cluster: Chromosome chr9 scaffold_7,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr9 scaffold_7, whole genome shotgun sequence
- Vitis vinifera (Grape), partial (27%)
Length = 461
Score = 75.8 bits (38), Expect = 2e-12
Identities = 119/146 (81%)
Strand = Plus / Plus
Query: 3076 ttcatggatgaacctacctctggccttgatgccagagctgctgctatagtgatgaggact 3135
|||||||||||||| || || || || |||| ||||| || ||||| || |||||| ||
Sbjct: 7 ttcatggatgaaccaacttcaggtctagatgttagagcagcagctattgttatgagggct 66
Query: 3136 gtgaggaatacagtagatacagggaggacagtggtctgcacaatccaccagcctagcatt 3195
|| || || || || ||||| || || ||||| || ||||| || |||||||||||||||
Sbjct: 67 gtcagaaacactgtggatactggaagaacagttgtttgcacgattcaccagcctagcatt 126
Query: 3196 gatatatttgatgcttttgatgagct 3221
||||| ||||| || |||||||||||
Sbjct: 127 gatatctttgaagcctttgatgagct 152
>gnl|LJGI|FS343429 similar to UniRef100_Q1M2R7 Cluster: PDR-like ABC-transporter; n=1;
Glycine max|Rep: PDR-like ABC-transporter - Glycine max
(Soybean), partial (17%)
Length = 742
Score = 71.9 bits (36), Expect = 3e-11
Identities = 84/100 (84%)
Strand = Plus / Plus
Query: 299 tgaagctcagagaacgcattgatcgagttggacttgatattccaacaattgaagtccgtt 358
||||||||||| | | |||||| |||||||| |||| |||| ||||| || || || |
Sbjct: 291 tgaagctcagacataggattgatagagttggaattgaccttcccacaatagaggttcgat 350
Query: 359 ttgagcacttgaatgttgaagcagaagctcatgtaggaag 398
||||||||||||| ||||||||||||||| |||||||||
Sbjct: 351 ttgagcacttgaacattgaagcagaagctcgtgtaggaag 390
Score = 67.9 bits (34), Expect = 4e-10
Identities = 85/102 (83%)
Strand = Plus / Plus
Query: 497 ttctcaataatgttagtggaatcatcaagcctaaaagaatgacactgctcttaggtcctc 556
||||||| ||||||||||||| || |||||| |||||||||||||| || || ||||
Sbjct: 489 ttctcaaggatgttagtggaataataaagccttctagaatgacactgcttttgggccctc 548
Query: 557 caacctccggaaaaaccacattactgttggcactggctggaa 598
||| || |||||||| ||| | ||||||||| |||||||||
Sbjct: 549 caagttcaggaaaaactacactcctgttggcattggctggaa 590
Score = 58.0 bits (29), Expect = 4e-07
Identities = 50/57 (87%)
Strand = Plus / Plus
Query: 694 caaactgatctgcacataggagaaatgacagtcagagaaacattggccttttcagca 750
|||| |||||| ||||| ||||||||||| || |||||||| |||||||| ||||||
Sbjct: 686 caaaatgatcttcacatgggagaaatgactgtaagagaaaccttggccttctcagca 742
>gnl|LJGI|TC80251
Length = 1316
Score = 71.9 bits (36), Expect = 3e-11
Identities = 72/84 (85%)
Strand = Plus / Plus
Query: 3221 tacttctcttgaagcgtggaggtgaggaaatatatgttgggcctttaggcctgcaatgtt 3280
||||| ||||||||| | |||||||| |||||||| | ||||||||||| ||| ||||
Sbjct: 770 tacttatcttgaagcatagaggtgagaaaatatatatggggcctttaggatggcagtgtt 829
Query: 3281 cacatctgatcaattactttgagg 3304
| ||||||||||||||||| ||||
Sbjct: 830 ctcatctgatcaattacttggagg 853
>gnl|LJGI|AI967680 similar to UniRef100_Q9XIE2 Cluster: Pleiotropic drug resistance
protein 8; n=1; Arabidopsis thaliana|Rep: Pleiotropic
drug resistance protein 8 - Arabidopsis thaliana
(Mouse-ear cress), partial (7%)
Length = 360
Score = 63.9 bits (32), Expect = 7e-09
Identities = 53/60 (88%)
Strand = Plus / Plus
Query: 3744 aactgtgcaaccagttgtagccattgagagaacagttttttatagagaaagagctgctgg 3803
|||||| ||||||||||| |||||||| ||||| || || ||||||||||| ||||||||
Sbjct: 157 aactgttcaaccagttgtggccattgaaagaactgtattctatagagaaagggctgctgg 216
>gnl|LJGI|TC79697 similar to UniRef100_A7R926 Cluster: Chromosome undetermined
scaffold_3238, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_3238,
whole genome shotgun sequence - Vitis vinifera (Grape),
partial (39%)
Length = 695
Score = 60.0 bits (30), Expect = 1e-07
Identities = 57/66 (86%)
Strand = Plus / Plus
Query: 3767 ttgagagaacagttttttatagagaaagagctgctggaatgtactcagctttgccatatg 3826
|||| |||||||| || |||||||||| ||||||||||||||| || || || || ||||
Sbjct: 137 ttgaaagaacagtcttctatagagaaaaagctgctggaatgtattctgccttaccctatg 196
Query: 3827 catttg 3832
||||||
Sbjct: 197 catttg 202
>gnl|LJGI|AV406931 similar to UniRef100_A7P7M5 Cluster: Chromosome chr9 scaffold_7,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr9 scaffold_7, whole genome shotgun sequence
- Vitis vinifera (Grape), partial (26%)
Length = 425
Score = 58.0 bits (29), Expect = 4e-07
Identities = 173/221 (78%)
Strand = Plus / Plus
Query: 1108 cacattctgaatggaacagctgtcatctctcttctccagccagcaccagaaacttttgag 1167
|||||||| ||||| || ||||| || || || |||||||||||||| || |||| |||
Sbjct: 20 cacattctcaatggcactgctgttatatcactgctccagccagcacccgagacttatgac 79
Query: 1168 ttatttgatgatatcattctcctctctgatggacaaattgtctaccaaggtccaagggaa 1227
| || ||||||||||| | |||||||||| ||| |||| ||||| ||||| | |||
Sbjct: 80 cttttcgatgatatcatcttaatctctgatggccaagttgtgtaccatggtccccgcgaa 139
Query: 1228 aatgtgcttgagttctttgaaaacatgggctttaagtgtcctgagagaaaaggagtagca 1287
|||| || || ||||| ||| |||||||| || ||||||||||| ||||| | ||
Sbjct: 140 tatgttctcgatttcttcgaatctatgggcttcaaatgtcctgagaggaaaggtgctgct 199
Query: 1288 gattttttacaagaagtaacatcaagaaaagatcaagaaca 1328
|| ||| | || |||||||| |||| || |||||||||||
Sbjct: 200 gactttcttcaggaagtaacttcaaagaaggatcaagaaca 240