Miyakogusa Predicted Gene
- Lj1g3v1911690.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj1g3v1911690.1 tr|G7JB30|G7JB30_MEDTR Phospholipase D
OS=Medicago truncatula GN=MTR_3g107360 PE=3 SV=1,82.89,0,no
description,NULL; PHOPHOLIPASE D ALPHA,NULL; PHOSPHOLIPASE
D,Phospholipase D family; Phospholipas,CUFF.28109.1
(2505 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC72480 similar to UniRef100_O04865 Cluster: Phospholip... 109 9e-23
gnl|LJGI|FS348320 weakly similar to UniRef100_P55939 Cluster: Ph... 103 5e-21
gnl|LJGI|BW631370 homologue to UniRef100_Q533V0 Cluster: Phospho... 80 8e-14
>gnl|LJGI|TC72480 similar to UniRef100_O04865 Cluster: Phospholipase D alpha 1; n=1;
Vigna unguiculata|Rep: Phospholipase D alpha 1 - Vigna
unguiculata (Cowpea), complete
Length = 2776
Score = 109 bits (55), Expect = 9e-23
Identities = 142/171 (83%)
Strand = Plus / Plus
Query: 1689 tgctttgcatctgataccaaaggagttgtcattgaagattgtgagcaagattgaagcagg 1748
|||||||||||| || |||||||| | ||| | |||||||| |||||||||||||| ||
Sbjct: 1693 tgctttgcatctaatcccaaaggaactttcacttaagattgttagcaagattgaagctgg 1752
Query: 1749 ggaaaggtttgttgtgtatgtagtgatcccaatgtggccagaaggtatgcctgaaagtgc 1808
||||| || |||||||| ||| |||||||||||||||| ||| | || ||||||||
Sbjct: 1753 ggaaaaattcaccgtgtatgttgtggtcccaatgtggccagagggtgtcccagaaagtgc 1812
Query: 1809 ttcagttcaggcaatactagattggcaaaggaggaccatggagatgatgta 1859
||||||||||||||| | || ||||| ||||| || |||||||||||||
Sbjct: 1813 atcagttcaggcaatattggactggcagaggagaacactggagatgatgta 1863
Score = 107 bits (54), Expect = 3e-22
Identities = 84/94 (89%)
Strand = Plus / Plus
Query: 2029 ttcatgatctatgttcattccaagatgatgatagtggatgatgaatacatcatcatcggt 2088
|||||||| |||||||| |||||||||||||||| |||||||||||||| ||| | ||
Sbjct: 2033 ttcatgatttatgttcacaccaagatgatgatagttgatgatgaatacataatcgttgga 2092
Query: 2089 tccgccaacatcaaccaaagatcaatggatggtg 2122
|| |||||||||||||| ||||||||||||||||
Sbjct: 2093 tctgccaacatcaaccagagatcaatggatggtg 2126
Score = 83.8 bits (42), Expect = 5e-15
Identities = 57/62 (91%)
Strand = Plus / Plus
Query: 328 tcaaacattatattcactgtaaaagatgataatccaattggagcaactctaattggaaga 387
||||| ||||| |||||||| |||||||||||||| |||||||||||| |||||||||||
Sbjct: 335 tcaaatattattttcactgtgaaagatgataatcccattggagcaactttaattggaaga 394
Query: 388 gc 389
||
Sbjct: 395 gc 396
>gnl|LJGI|FS348320 weakly similar to UniRef100_P55939 Cluster: Phospholipase D alpha 2
precursor; n=1; Brassica oleracea var. capitata|Rep:
Phospholipase D alpha 2 precursor - Brassica oleracea
var. capitata (Cabbage), partial (12%)
Length = 582
Score = 103 bits (52), Expect = 5e-21
Identities = 64/68 (94%)
Strand = Plus / Minus
Query: 2092 gccaacatcaaccaaagatcaatggatggtggaagagatacagagatagcaatgggagca 2151
|||||||| ||||| |||||||||||||||||||||||||||||||| |||||||| |||
Sbjct: 580 gccaacataaaccagagatcaatggatggtggaagagatacagagattgcaatgggtgca 521
Query: 2152 ttccaacc 2159
||||||||
Sbjct: 520 ttccaacc 513
>gnl|LJGI|BW631370 homologue to UniRef100_Q533V0 Cluster: Phospholipase D alpha; n=1;
Fragaria x ananassa|Rep: Phospholipase D alpha - Fragaria
ananassa (Strawberry), partial (18%)
Length = 468
Score = 79.8 bits (40), Expect = 8e-14
Identities = 88/104 (84%)
Strand = Plus / Plus
Query: 1534 attagtggcaaggataatgtcattgacagaagcattcaggatgcatacataaatgctatt 1593
|||||||| || |||||| ||||||| | |||||||| ||||| || || ||||||||
Sbjct: 342 attagtgggaaagataatatcattgatcgtagcattcaagatgcttatattcatgctatt 401
Query: 1594 cgacgagcaaagaaattcatctacattgaaaatcaatatttcct 1637
||||| |||||||| |||||||| |||||||| || ||||||||
Sbjct: 402 cgacgcgcaaagaatttcatctatattgaaaaccagtatttcct 445