Miyakogusa Predicted Gene

Lj1g3v1911640.2
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj1g3v1911640.2 tr|Q0E301|Q0E301_ORYSJ Os02g0201000 protein
OS=Oryza sativa subsp. japonica GN=Os02g0201000 PE=4
SV=,57.45,8e-19,DUF4050,Domain of unknown function
DUF4050,CUFF.28111.2
         (480 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|BP053975                                                     101   4e-21
gnl|LJGI|TC76388                                                       56   2e-07

>gnl|LJGI|BP053975 
          Length = 348

 Score =  101 bits (51), Expect = 4e-21
 Identities = 51/51 (100%)
 Strand = Plus / Minus

                                                              
Query: 430 attcctcttggagtaagttcttgcattctaacttgcttctttatctggtga 480
           |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 348 attcctcttggagtaagttcttgcattctaacttgcttctttatctggtga 298


>gnl|LJGI|TC76388 
          Length = 729

 Score = 56.0 bits (28), Expect = 2e-07
 Identities = 55/64 (85%)
 Strand = Plus / Plus

                                                                       
Query: 271 gaatttgtcaatcatggtcttcgtctctggaagcagacaaggaaacaatgggttggaaat 330
           ||||||||||| ||||| |||| || |||| | ||||  ||| |||||||||||||||||
Sbjct: 285 gaatttgtcaaccatgggcttcttcactggtaccagatgaggcaacaatgggttggaaat 344

               
Query: 331 aaaa 334
           ||||
Sbjct: 345 aaaa 348