Miyakogusa Predicted Gene
- Lj1g3v1901610.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj1g3v1901610.1 Non Chatacterized Hit- tr|J3L2A1|J3L2A1_ORYBR
Uncharacterized protein OS=Oryza brachyantha
GN=OB01G3,40.21,0.0000000000003,PROTEIN_KINASE_ATP,Protein kinase, ATP
binding site; PROTEIN_KINASE_ST,Serine/threonine-protein
kina,CUFF.28100.1
(1333 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC61873 similar to UniRef100_A7P5U0 Cluster: Chromosome... 1191 0.0
gnl|LJGI|AV409831 similar to UniRef100_O49361 Cluster: S-recepto... 747 0.0
gnl|LJGI|GO011749 similar to UniRef100_A1IGC6 Cluster: PERK1-lik... 54 2e-06
>gnl|LJGI|TC61873 similar to UniRef100_A7P5U0 Cluster: Chromosome chr4 scaffold_6,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr4 scaffold_6, whole genome shotgun sequence
- Vitis vinifera (Grape), partial (25%)
Length = 780
Score = 1191 bits (601), Expect = 0.0
Identities = 601/601 (100%)
Strand = Plus / Plus
Query: 733 atcaagccagaaaatgtgcttctggatgatcatttcatggctaaagtttcagattttggc 792
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 atcaagccagaaaatgtgcttctggatgatcatttcatggctaaagtttcagattttggc 60
Query: 793 ctcgcgaagctaatgaaccgagaacaaagccatgttttcacaacactgagaggcactcgg 852
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 ctcgcgaagctaatgaaccgagaacaaagccatgttttcacaacactgagaggcactcgg 120
Query: 853 ggctaccttgccccggagtggataacaaactatgctatatcagagaaaagtgatgtgtac 912
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 ggctaccttgccccggagtggataacaaactatgctatatcagagaaaagtgatgtgtac 180
Query: 913 agctatgggatggtgctgctagagatcattggcgggaggaaaaactatgatcctaaagag 972
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 agctatgggatggtgctgctagagatcattggcgggaggaaaaactatgatcctaaagag 240
Query: 973 acttcagagaaatcccatttcccaacttttgcttacaagatgatggaagaagggaagctg 1032
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 acttcagagaaatcccatttcccaacttttgcttacaagatgatggaagaagggaagctg 300
Query: 1033 agggatatttttgattcagggttggaaattgatgagaatgatgacaggtttcaatgtgct 1092
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 agggatatttttgattcagggttggaaattgatgagaatgatgacaggtttcaatgtgct 360
Query: 1093 atcaaagttgcattgtggtgcatacaagaagacatgtcactgaggccttccatgaccaga 1152
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 atcaaagttgcattgtggtgcatacaagaagacatgtcactgaggccttccatgaccaga 420
Query: 1153 gttgtccaaatgctggagggtctttgcattgttcctcagccaccaactagttctgctttg 1212
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 gttgtccaaatgctggagggtctttgcattgttcctcagccaccaactagttctgctttg 480
Query: 1213 ggttctcgcctattctcaactgtattccgattgtccagtgaaggcgccacctcttccggc 1272
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 ggttctcgcctattctcaactgtattccgattgtccagtgaaggcgccacctcttccggc 540
Query: 1273 ccatcagactgtaatagtgatgcctatctctccgctgttcgcctttccgggccaagataa 1332
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 ccatcagactgtaatagtgatgcctatctctccgctgttcgcctttccgggccaagataa 600
Query: 1333 c 1333
|
Sbjct: 601 c 601
>gnl|LJGI|AV409831 similar to UniRef100_O49361 Cluster: S-receptor kinase -like
protein; n=1; Arabidopsis thaliana|Rep: S-receptor
kinase -like protein - Arabidopsis thaliana (Mouse-ear
cress), partial (4%)
Length = 420
Score = 747 bits (377), Expect = 0.0
Identities = 380/381 (99%)
Strand = Plus / Plus
Query: 1 atgttcttccacaagagttcagggaagtgttttctgttggatagcattggaagctttcag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 40 atgttcttccacaagagttcagggaagtgttttctgttggatagcattggaagctttcag 99
Query: 61 aagcctgatgaggatcccggttatgtttcttacatcaaggtctcgagtgatggaggcgtg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 100 aagcctgatgaggatcccggttatgtttcttacatcaaggtctcgagtgatggaggcgtg 159
Query: 121 ggcgctggctcagggggcgggggaagcagcagtaaacacactgcagttattgtggtcatt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 160 ggcgctggctcagggggcgggggaagcagcagtaaacacactgcagttattgtggtcatt 219
Query: 181 gtgataataacattgattatcatttctggcatgctctttgtgggagttagatactacaga 240
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 220 gtgataataacattgattatcatttgtggcatgctctttgtgggagttagatactacaga 279
Query: 241 agaaagcaaaaattgcctgagtctcctaaggataactcagaagaggacaatttcttggag 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 280 agaaagcaaaaattgcctgagtctcctaaggataactcagaagaggacaatttcttggag 339
Query: 301 aatttaactggtatgccaatccggtttagctacaaagaccttgaagaggcaactaatcac 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 340 aatttaactggtatgccaatccggtttagctacaaagaccttgaagaggcaactaatcac 399
Query: 361 ttctctgtgaagcttggtcaa 381
|||||||||||||||||||||
Sbjct: 400 ttctctgtgaagcttggtcaa 420
>gnl|LJGI|GO011749 similar to UniRef100_A1IGC6 Cluster: PERK1-like protein kinase;
n=2; Nicotiana tabacum|Rep: PERK1-like protein kinase -
Nicotiana tabacum (Common tobacco), partial (38%)
Length = 755
Score = 54.0 bits (27), Expect = 2e-06
Identities = 42/47 (89%)
Strand = Plus / Plus
Query: 676 gcaaaagggcttgcatatttgcatgaagactgtgactctaagatcat 722
|||||||||||||||||| | |||||||| ||| || ||||||||||
Sbjct: 160 gcaaaagggcttgcatatcttcatgaagattgtcaccctaagatcat 206