Miyakogusa Predicted Gene

Lj1g3v1900590.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj1g3v1900590.1 Non Chatacterized Hit- tr|B9ETM2|B9ETM2_ORYSJ
Putative uncharacterized protein OS=Oryza sativa
subsp,42.98,6e-18,seg,NULL; FAMILY NOT NAMED,NULL,CUFF.28097.1
         (1854 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC59966 similar to UniRef100_A7Q079 Cluster: Chromosome...    74   3e-12

>gnl|LJGI|TC59966 similar to UniRef100_A7Q079 Cluster: Chromosome chr8 scaffold_41,
            whole genome shotgun sequence; n=2; Vitis vinifera|Rep:
            Chromosome chr8 scaffold_41, whole genome shotgun
            sequence - Vitis vinifera (Grape), partial (34%)
          Length = 1324

 Score = 73.8 bits (37), Expect = 3e-12
 Identities = 67/77 (87%)
 Strand = Plus / Plus

                                                                        
Query: 1474 gatgcttactacatcattgactcattgggggagagactttttgaggggtgcaatcaagca 1533
            ||||||||||||||||||||| | ||||||||||| |||| ||| || |||||||| |||
Sbjct: 516  gatgcttactacatcattgacactttgggggagaggctttatgaaggatgcaatcaggca 575

                             
Query: 1534 ttcatgttgaagtttga 1550
            | ||| ||||| |||||
Sbjct: 576  tacatcttgaaatttga 592