Miyakogusa Predicted Gene
- Lj1g3v1889550.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj1g3v1889550.1 Non Chatacterized Hit- tr|I1JUC2|I1JUC2_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.6226
PE=,84.98,0,CLATHRIN ASSEMBLY PROTEIN,NULL; GAT-like domain,NULL;
ENTH/VHS domain,ENTH/VHS; no description,ENTH/,CUFF.28561.1
(1974 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC78940 similar to UniRef100_A7P5U4 Cluster: Chromosome... 1263 0.0
gnl|LJGI|TC76300 similar to UniRef100_A7P5U4 Cluster: Chromosome... 955 0.0
gnl|LJGI|AV419617 similar to UniRef100_A7P5U4 Cluster: Chromosom... 472 e-132
gnl|LJGI|TC79840 similar to UniRef100_A7P5U4 Cluster: Chromosome... 293 2e-78
gnl|LJGI|BW601305 similar to UniRef100_A7P5U4 Cluster: Chromosom... 60 6e-08
>gnl|LJGI|TC78940 similar to UniRef100_A7P5U4 Cluster: Chromosome chr4 scaffold_6,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr4 scaffold_6, whole genome shotgun sequence
- Vitis vinifera (Grape), partial (34%)
Length = 642
Score = 1263 bits (637), Expect = 0.0
Identities = 639/640 (99%)
Strand = Plus / Plus
Query: 1164 tgaacagccagaagaggagcctgtaccggatatgaacgaaatcaaggcactgcctccacc 1223
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3 tgaacagccagaagaggagcctgtaccggatatgaacgaaatcaaggcactgcctccacc 62
Query: 1224 tgagaattataccccgccacctcaacctgagccagagcctaaaccacaaccacaagttca 1283
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 63 tgagaattataccccgccacctcaacctgagccagagcctaaaccacaaccacaagttca 122
Query: 1284 ggaggacttggtgaatctgagggaggatgcagtcactgcagatgaccagggcaatagatt 1343
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 123 ggaggacttggtgaatctgagggaggatgcagtcactgcagatgaccagggcaatagatt 182
Query: 1344 tgctttggcactctttgctggtgcaccagctaatggaaatggatcatggcaagcctttcc 1403
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 183 tgcttnggcactctttgctggtgcaccagctaatggaaatggatcatggcaagcctttcc 242
Query: 1404 ctcaaacggacagccggaagtgacttcagcttggcaaaacccagcggcagaacctgggaa 1463
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 243 ctcaaacggacagccggaagtgacttcagcttggcaaaacccagcggcagaacctgggaa 302
Query: 1464 agccgattgggaattggcattggtagagactgctagcaatttggcaaaccagaaggcagc 1523
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 303 agccgattgggaattggcattggtagagactgctagcaatttggcaaaccagaaggcagc 362
Query: 1524 tttaggtggtggccttgatcccttattgttgaatggcatgtatgatcaaggaatggtgag 1583
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 363 tttaggtggtggccttgatcccttattgttgaatggcatgtatgatcaaggaatggtgag 422
Query: 1584 gcagcatgtcagcactgccaatctgagtggaggaagtgcaagtagcgtggcattgccagg 1643
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 423 gcagcatgtcagcactgccaatctgagtggaggaagtgcaagtagcgtggcattgccagg 482
Query: 1644 accggggaagaccacaacacctgttttagctcttccagccccagatggatcggtgcagcc 1703
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 483 accggggaagaccacaacacctgttttagctcttccagccccagatggatcggtgcagcc 542
Query: 1704 agttaatcaggatccatttgcagcatcattgaccattccacccccttcctatgtgcaaat 1763
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 543 agttaatcaggatccatttgcagcatcattgaccattccacccccttcctatgtgcaaat 602
Query: 1764 ggctgatatggagaagaagcagcacttgctcgtgcaggag 1803
||||||||||||||||||||||||||||||||||||||||
Sbjct: 603 ggctgatatggagaagaagcagcacttgctcgtgcaggag 642
>gnl|LJGI|TC76300 similar to UniRef100_A7P5U4 Cluster: Chromosome chr4 scaffold_6,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr4 scaffold_6, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (26%)
Length = 727
Score = 955 bits (482), Expect = 0.0
Identities = 482/482 (100%)
Strand = Plus / Plus
Query: 1 atggcttcgagcacgattcggaaggcgattggtgcggtgaaggaccagaccagcataggg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 172 atggcttcgagcacgattcggaaggcgattggtgcggtgaaggaccagaccagcataggg 231
Query: 61 atagccaaggtggcgagcaacatggcgccggagcttgaggtggcgattgtgaaggcgacg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 232 atagccaaggtggcgagcaacatggcgccggagcttgaggtggcgattgtgaaggcgacg 291
Query: 121 agccacgatgaggatccggcgagtgagaagtacgcgcgggaggttttgaatttgatgtca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 292 agccacgatgaggatccggcgagtgagaagtacgcgcgggaggttttgaatttgatgtca 351
Query: 181 tactcgcgcggctatgttcacgcgtgtgtgtcggcggtgtctaagagattggggaagacg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 352 tactcgcgcggctatgttcacgcgtgtgtgtcggcggtgtctaagagattggggaagacg 411
Query: 241 agggactggatcgtggctttgaaggcgctgatgttgactcaccggttgatgaatgagggt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 412 agggactggatcgtggctttgaaggcgctgatgttgactcaccggttgatgaatgagggt 471
Query: 301 cctccgttgttccaggaggagatcgtgtatgctacacggagggggactaggctgcttaat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 472 cctccgttgttccaggaggagatcgtgtatgctacacggagggggactaggctgcttaat 531
Query: 361 atgtctgatttcagggatgaggctcactccagctcttgggatcactctgcttttgtcagg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 532 atgtctgatttcagggatgaggctcactccagctcttgggatcactctgcttttgtcagg 591
Query: 421 acctatgctttgtatctggatcagcgcctcgagatgatgcttttcgacaggaagagtagc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 592 acctatgctttgtatctggatcagcgcctcgagatgatgcttttcgacaggaagagtagc 651
Query: 481 ct 482
||
Sbjct: 652 ct 653
>gnl|LJGI|AV419617 similar to UniRef100_A7P5U4 Cluster: Chromosome chr4 scaffold_6,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr4 scaffold_6, whole genome shotgun sequence
- Vitis vinifera (Grape), partial (13%)
Length = 238
Score = 472 bits (238), Expect = e-132
Identities = 238/238 (100%)
Strand = Plus / Plus
Query: 910 cttgacaagttctttgatatggagtacacggattgcgtgaaggcctttgatgcttatgca 969
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 cttgacaagttctttgatatggagtacacggattgcgtgaaggcctttgatgcttatgca 60
Query: 970 agtgcggctaagcagattgatgagctggttgcattctataattggtgcaaggatacgggt 1029
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 agtgcggctaagcagattgatgagctggttgcattctataattggtgcaaggatacgggt 120
Query: 1030 gtggggaggtcctcggagtaccctgaagttcagaggattactgctaagttgctggagaca 1089
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gtggggaggtcctcggagtaccctgaagttcagaggattactgctaagttgctggagaca 180
Query: 1090 ttggaggagtttgtgagggatagggccaagaggccgaaaagtcctgagaggaaagagg 1147
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ttggaggagtttgtgagggatagggccaagaggccgaaaagtcctgagaggaaagagg 238
>gnl|LJGI|TC79840 similar to UniRef100_A7P5U4 Cluster: Chromosome chr4 scaffold_6,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr4 scaffold_6, whole genome shotgun sequence
- Vitis vinifera (Grape), partial (7%)
Length = 709
Score = 293 bits (148), Expect = 2e-78
Identities = 194/208 (93%), Gaps = 1/208 (0%)
Strand = Plus / Plus
Query: 1767 tgatatggagaagaagcagcacttgctcgtgcaggagcaacaggtttggaatcagtatgc 1826
||||||||||||||||| |||||||||||||| ||||| || ||||||||||| ||||||
Sbjct: 1 tgatatggagaagaagccgcacttgctcgtgccggagccaccggtttggaatccgtatgc 60
Query: 1827 gagggatgggatgcaaggccaatctagcttggccaaattgaacggtgccggatactatcc 1886
|||||||||||||| ||||| |||||| ||||| ||||||||||||||||||||||||||
Sbjct: 61 gagggatgggatgccaggcccatctag-ttggctaaattgaacggtgccggatactatcc 119
Query: 1887 tggaggtcctatgccaatgatgccttatgggatgcccccagtcaatggaatgggacctcc 1946
||||||||||||||| ||||||||||||||||||||||| ||| ||||||||||||||||
Sbjct: 120 tggaggtcctatgcccatgatgccttatgggatgccccccgtccatggaatgggacctcc 179
Query: 1947 aaccgggtattaccaagctccttactga 1974
||||||||||||| |||||||||||||
Sbjct: 180 caccgggtattacccagctccttactga 207
>gnl|LJGI|BW601305 similar to UniRef100_A7P5U4 Cluster: Chromosome chr4 scaffold_6,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr4 scaffold_6, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (8%)
Length = 473
Score = 60.0 bits (30), Expect = 6e-08
Identities = 63/74 (85%)
Strand = Plus / Plus
Query: 1 atggcttcgagcacgattcggaaggcgattggtgcggtgaaggaccagaccagcataggg 60
||||| ||||||||||| || ||||||||||||| |||||||| || |||||||| |
Sbjct: 311 atggcatcgagcacgatccgcaaggcgattggtgttgtgaaggatcaaaccagcatcagc 370
Query: 61 atagccaaggtggc 74
|||||||| |||||
Sbjct: 371 atagccaaagtggc 384