Miyakogusa Predicted Gene
- Lj1g3v1888530.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj1g3v1888530.1 Non Chatacterized Hit- tr|G7JAH7|G7JAH7_MEDTR
Putative uncharacterized protein OS=Medicago truncatul,82.28,0,no
description,Phox homologous domain; PX domain,Phox homologous domain;
PhoX homologous domain, pre,CUFF.28223.1
(1920 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|GO005248 similar to UniRef100_A7P5V4 Cluster: Chromosom... 1166 0.0
gnl|LJGI|TC63213 similar to UniRef100_A7P5V4 Cluster: Chromosome... 1023 0.0
gnl|LJGI|TC61444 weakly similar to UniRef100_A7P5V4 Cluster: Chr... 954 0.0
gnl|LJGI|BE122613 similar to UniRef100_A7P5V4 Cluster: Chromosom... 702 0.0
>gnl|LJGI|GO005248 similar to UniRef100_A7P5V4 Cluster: Chromosome chr4 scaffold_6,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr4 scaffold_6, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (27%)
Length = 759
Score = 1166 bits (588), Expect = 0.0
Identities = 591/592 (99%)
Strand = Plus / Plus
Query: 1 atgcagagacgaagtcctcccaagcacaggcacgatgggacttcgccgctgcctctcggc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 168 atgcagagacgaagtcctcccaagcacaggcacgatgggacttcgccgctgcctctcggc 227
Query: 61 atggattggagtcctgcacccagaaaatgggatgggcgggatacaatatggccccatgat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 228 atggattggagtcctgcacccagaaaatgggatgggcgggatacaatatggccccatgat 287
Query: 121 catcgtagtggttggagttattgtgttatcgtaccttcgtgggtcttcgttccaaagtcg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 288 catcgtagtggttggagttattgtgttatcgtaccttcgtgggtcttcgttccaaagtcg 347
Query: 181 aagaattcagatcccatagtgttctacagggttcaagttggagtacagtcaccagaaggg 240
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 348 aagaattcagatcccatagtgttctacagggctcaagttggagtacagtcaccagaaggg 407
Query: 241 actacaaggctccatggagtactaagaaggttcaatgattttctaaggttgtttgctgat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 408 actacaaggctccatggagtactaagaaggttcaatgattttctaaggttgtttgctgat 467
Query: 301 gttaaaaaggaatttcccaggaaaagtatccctccagcaccacccaagggactgttgcga 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 468 gttaaaaaggaatttcccaggaaaagtatccctccagcaccacccaagggactgttgcga 527
Query: 361 ttgaaaagccgagccttgctggaagagagaaggcgctctttggaggaatggatcaccaaa 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 528 ttgaaaagccgagccttgctggaagagagaaggcgctctttggaggaatggatcaccaaa 587
Query: 421 ctattgtctgacattgatatatcaagatgtgctgcagtggcatcattttttgagctagaa 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 588 ctattgtctgacattgatatatcaagatgtgctgcagtggcatcattttttgagctagaa 647
Query: 481 gctgctgcaagatcttcattccaagatgcaagccagcagaattcagaaacagaacctgat 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 648 gctgctgcaagatcttcattccaagatgcaagccagcagaattcagaaacagaacctgat 707
Query: 541 gccaataacagagcttattcaatgcaatcacctctccattcgagcttatcat 592
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 708 gccaataacagagcttattcaatgcaatcacctctccattcgagcttatcat 759
>gnl|LJGI|TC63213 similar to UniRef100_A7P5V4 Cluster: Chromosome chr4 scaffold_6,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr4 scaffold_6, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (26%)
Length = 749
Score = 1023 bits (516), Expect = 0.0
Identities = 516/516 (100%)
Strand = Plus / Plus
Query: 1 atgcagagacgaagtcctcccaagcacaggcacgatgggacttcgccgctgcctctcggc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 234 atgcagagacgaagtcctcccaagcacaggcacgatgggacttcgccgctgcctctcggc 293
Query: 61 atggattggagtcctgcacccagaaaatgggatgggcgggatacaatatggccccatgat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 294 atggattggagtcctgcacccagaaaatgggatgggcgggatacaatatggccccatgat 353
Query: 121 catcgtagtggttggagttattgtgttatcgtaccttcgtgggtcttcgttccaaagtcg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 354 catcgtagtggttggagttattgtgttatcgtaccttcgtgggtcttcgttccaaagtcg 413
Query: 181 aagaattcagatcccatagtgttctacagggttcaagttggagtacagtcaccagaaggg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 414 aagaattcagatcccatagtgttctacagggttcaagttggagtacagtcaccagaaggg 473
Query: 241 actacaaggctccatggagtactaagaaggttcaatgattttctaaggttgtttgctgat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 474 actacaaggctccatggagtactaagaaggttcaatgattttctaaggttgtttgctgat 533
Query: 301 gttaaaaaggaatttcccaggaaaagtatccctccagcaccacccaagggactgttgcga 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 534 gttaaaaaggaatttcccaggaaaagtatccctccagcaccacccaagggactgttgcga 593
Query: 361 ttgaaaagccgagccttgctggaagagagaaggcgctctttggaggaatggatcaccaaa 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 594 ttgaaaagccgagccttgctggaagagagaaggcgctctttggaggaatggatcaccaaa 653
Query: 421 ctattgtctgacattgatatatcaagatgtgctgcagtggcatcattttttgagctagaa 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 654 ctattgtctgacattgatatatcaagatgtgctgcagtggcatcattttttgagctagaa 713
Query: 481 gctgctgcaagatcttcattccaagatgcaagccag 516
||||||||||||||||||||||||||||||||||||
Sbjct: 714 gctgctgcaagatcttcattccaagatgcaagccag 749
>gnl|LJGI|TC61444 weakly similar to UniRef100_A7P5V4 Cluster: Chromosome chr4
scaffold_6, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr4 scaffold_6, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (15%)
Length = 1081
Score = 954 bits (481), Expect = 0.0
Identities = 514/520 (98%), Gaps = 5/520 (0%)
Strand = Plus / Plus
Query: 1401 aatgcagtgggatatggaggaacttcgacgaaaatcattggaaatggagatgaaactaaa 1460
||||||||||||||||||||| |||||||||||||| ||||||| ||||||| |||||
Sbjct: 5 aatgcagtgggatatggaggac--tcgacgaaaatcat-ggaaatg-agatgaa-ctaaa 59
Query: 1461 gtctgaatcggttggaaattctagtcaagatgatgtgctgatgcagaatttagatgctgc 1520
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 60 gtctgaatcggttggaaattctagtcaagatgatgtgctgatgcagaatttagatgctgc 119
Query: 1521 taagaagcagctggagagtttgtcaaaacagtatggagagctagaagcgaaatccaaagc 1580
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 120 taagaagcagctggagagtttgtcaaaacagtatggagagctagaagcgaaatccaaagc 179
Query: 1581 agatgtaaaagttctggttaaagaggtcaaatctctccgtaagtcccaaacagaattgaa 1640
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 180 agatgtaaaagttctggttaaagaggtcaaatctctccgtaagtcccaaacagaattgaa 239
Query: 1641 gaaggaacttggtgggtcgataaaggataagtgtgaagctgagaaactactacttcacga 1700
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 240 gaaggaacttggtgggtcgataaaggataagtgtgaagctgagaaactactacttcacga 299
Query: 1701 aagagagaagcgggaacaggcagaagctggttggagagaactgacagagaaatgcaagct 1760
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 300 aagagagaagcgggaacaggcagaagctggttggagagaactgacagagaaatgcaagct 359
Query: 1761 tctttttagccagcttcaagaatgcaatgtcagtcttccttatgatgacgaagataggaa 1820
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 360 tctttttagccagcttcaagaatgcaatgtcagtcttccttatgatgacgaagataggaa 419
Query: 1821 aatcatgaacccatcatcattacatgatgcttctaatcgattaacaacagctgatgatca 1880
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 420 aatcatgaacccatcatcattacatgatgcttctaatcgattaacaacagctgatgatca 479
Query: 1881 aattgacatcctactagcagaggtagaaaatttagagaag 1920
||||||||||||||||||||||||||||||||||||||||
Sbjct: 480 aattgacatcctactagcagaggtagaaaatttagagaag 519
>gnl|LJGI|BE122613 similar to UniRef100_A7P5V4 Cluster: Chromosome chr4 scaffold_6,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr4 scaffold_6, whole genome shotgun sequence
- Vitis vinifera (Grape), partial (17%)
Length = 354
Score = 702 bits (354), Expect = 0.0
Identities = 354/354 (100%)
Strand = Plus / Plus
Query: 1074 tcttgatcttcctggatatgcttcagtttcaagagaaacagatataatggaccccacaaa 1133
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tcttgatcttcctggatatgcttcagtttcaagagaaacagatataatggaccccacaaa 60
Query: 1134 gttgaagtctactggtgatgctcagttagtccttccacaagatcaacgcaataaattaaa 1193
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 gttgaagtctactggtgatgctcagttagtccttccacaagatcaacgcaataaattaaa 120
Query: 1194 cagggttctttcaaccatgcagagaaggctagtcactgcaaaaactgatatggaggacct 1253
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 cagggttctttcaaccatgcagagaaggctagtcactgcaaaaactgatatggaggacct 180
Query: 1254 tatagttagattaaatcaagaaatggctgcaaaggattttcttgctacgaaggtcaagga 1313
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 tatagttagattaaatcaagaaatggctgcaaaggattttcttgctacgaaggtcaagga 240
Query: 1314 tttggaagttgaacttgaaactagcaaacagaaaaataaggaaaacttgcagcaggctat 1373
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 tttggaagttgaacttgaaactagcaaacagaaaaataaggaaaacttgcagcaggctat 300
Query: 1374 tctgattgagagggaaaggtttacccaaatgcagtgggatatggaggaacttcg 1427
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 tctgattgagagggaaaggtttacccaaatgcagtgggatatggaggaacttcg 354