Miyakogusa Predicted Gene

Lj1g3v1857400.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj1g3v1857400.1 Non Chatacterized Hit- tr|A3BKR7|A3BKR7_ORYSJ
Putative uncharacterized protein OS=Oryza sativa
subsp,43.06,0.0000008,seg,NULL; no description,Armadillo-like
helical,CUFF.28086.1
         (541 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC62290 similar to UniRef100_A7P636 Cluster: Chromosome...   192   2e-48
gnl|LJGI|TC59826 similar to UniRef100_A5V249 Cluster: Integrin a...   103   1e-21

>gnl|LJGI|TC62290 similar to UniRef100_A7P636 Cluster: Chromosome chr4 scaffold_6,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr4 scaffold_6, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (11%)
          Length = 908

 Score =  192 bits (97), Expect = 2e-48
 Identities = 97/97 (100%)
 Strand = Plus / Plus

                                                                       
Query: 445 aaattggaggtattgaagatggtgaagaaggcttctcagtcagatgcagagtgcgccacc 504
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1   aaattggaggtattgaagatggtgaagaaggcttctcagtcagatgcagagtgcgccacc 60

                                                
Query: 505 gttagcgccgagatactgtggggttctacgccataaa 541
           |||||||||||||||||||||||||||||||||||||
Sbjct: 61  gttagcgccgagatactgtggggttctacgccataaa 97


>gnl|LJGI|TC59826 similar to UniRef100_A5V249 Cluster: Integrin alpha beta-propellor
           repeat protein precursor; n=1; Roseiflexus sp. RS-1|Rep:
           Integrin alpha beta-propellor repeat protein precursor -
           Roseiflexus sp. (strain RS-1), partial (4%)
          Length = 773

 Score =  103 bits (52), Expect = 1e-21
 Identities = 52/52 (100%)
 Strand = Plus / Plus

                                                               
Query: 1   atgggtcctaccatcaaggcgttgatagctatggcttctacgtgttcggttc 52
           ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 722 atgggtcctaccatcaaggcgttgatagctatggcttctacgtgttcggttc 773