Miyakogusa Predicted Gene
- Lj1g3v1855350.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj1g3v1855350.1 Non Chatacterized Hit- tr|I1K8S0|I1K8S0_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.11385 PE,81.36,0,FAMILY
NOT NAMED,NULL,CUFF.28088.1
(858 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC61940 similar to UniRef100_A7QS35 Cluster: Chromosome... 1427 0.0
gnl|LJGI|GO036761 52 6e-06
gnl|LJGI|TC64678 similar to UniRef100_A7QS35 Cluster: Chromosome... 52 6e-06
>gnl|LJGI|TC61940 similar to UniRef100_A7QS35 Cluster: Chromosome undetermined
scaffold_155, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_155,
whole genome shotgun sequence - Vitis vinifera (Grape),
partial (69%)
Length = 888
Score = 1427 bits (720), Expect = 0.0
Identities = 734/736 (99%), Gaps = 2/736 (0%)
Strand = Plus / Plus
Query: 123 tctccataatgtaacagcagacacttgtgtagccatggatgagtggattcagtatcctgc 182
||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 3 tctccataatgta-cagcagacacttgtgtagccatggatgagtggattcagtatc-tgc 60
Query: 183 tgcaaatactgctctggatgatattctgccctgtgtggacaatgccactgcacaagaaac 242
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tgcaaatactgctctggatgatattctgccctgtgtggacaatgccactgcacaagaaac 120
Query: 243 atttctacgaagcaaagaagtaacttctgaactagtgaatttagtgaaccaggttataac 302
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 atttctacgaagcaaagaagtaacttctgaactagtgaatttagtgaaccaggttataac 180
Query: 303 caatgtctccaacataaatttcgcccccaatttcacgccactgttctacaatcaatccgg 362
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 caatgtctccaacataaatttcgcccccaatttcacgccactgttctacaatcaatccgg 240
Query: 363 ccctgtcatgccgctcctctgcaatccgtttcatcctgacatgacagatagactatgtga 422
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 ccctgtcatgccgctcctctgcaatccgtttcatcctgacatgacagatagactatgtga 300
Query: 423 ccctggtgaagtgaccctaagcaatgcaacacaggtgtatggcaactttgtgtgccaagt 482
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 ccctggtgaagtgaccctaagcaatgcaacacaggtgtatggcaactttgtgtgccaagt 360
Query: 483 ttcaccctcagatatttgcacaacacaagggcgtttgacaccaaccttctataatcagat 542
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 ttcaccctcagatatttgcacaacacaagggcgtttgacaccaaccttctataatcagat 420
Query: 543 atccacaggaataaacgtgggaaacgccttgtatagttatgctccttctttggttgagtt 602
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 atccacaggaataaacgtgggaaacgccttgtatagttatgctccttctttggttgagtt 480
Query: 603 acaagactgcacctttgttcgtgaaactttcagtgacatttcaagggagcattgtcctgg 662
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 acaagactgcacctttgttcgtgaaactttcagtgacatttcaagggagcattgtcctgg 540
Query: 663 tctacgacgttatagtaaatggatctatgctggattggtgatggtttcctttgctgtgat 722
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 tctacgacgttatagtaaatggatctatgctggattggtgatggtttcctttgctgtgat 600
Query: 723 gttctccttgatcttctgggttgtgtatggaagagaacgaagatatcgtctatatacaaa 782
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 gttctccttgatcttctgggttgtgtatggaagagaacgaagatatcgtctatatacaaa 660
Query: 783 agaaacaaaagagttaacaccagtaccaggacgagcaccatcaacttcacgagcattagt 842
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 agaaacaaaagagttaacaccagtaccaggacgagcaccatcaacttcacgagcattagt 720
Query: 843 actaaatccatgaagg 858
||||||||||||||||
Sbjct: 721 actaaatccatgaagg 736
>gnl|LJGI|GO036761
Length = 604
Score = 52.0 bits (26), Expect = 6e-06
Identities = 71/86 (82%)
Strand = Plus / Plus
Query: 148 tgtgtagccatggatgagtggattcagtatcctgctgcaaatactgctctggatgatatt 207
||||| ||||||||||||||| ||| | | ||| ||||| |||| || ||||||| |||
Sbjct: 407 tgtgttgccatggatgagtgggttctgaaccctactgcacatacggccttggatgaaatt 466
Query: 208 ctgccctgtgtggacaatgccactgc 233
|| || |||||||| ||||| |||||
Sbjct: 467 cttccgtgtgtggataatgcaactgc 492
>gnl|LJGI|TC64678 similar to UniRef100_A7QS35 Cluster: Chromosome undetermined
scaffold_155, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_155,
whole genome shotgun sequence - Vitis vinifera (Grape),
partial (86%)
Length = 1092
Score = 52.0 bits (26), Expect = 6e-06
Identities = 71/86 (82%)
Strand = Plus / Plus
Query: 148 tgtgtagccatggatgagtggattcagtatcctgctgcaaatactgctctggatgatatt 207
||||| ||||||||||||||| ||| | | ||| ||||| |||| || ||||||| |||
Sbjct: 291 tgtgttgccatggatgagtgggttctgaaccctactgcacatacggccttggatgaaatt 350
Query: 208 ctgccctgtgtggacaatgccactgc 233
|| || |||||||| ||||| |||||
Sbjct: 351 cttccgtgtgtggataatgcaactgc 376