Miyakogusa Predicted Gene
- Lj1g3v1853300.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj1g3v1853300.1 Non Chatacterized Hit- tr|I1K8R6|I1K8R6_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.634
PE=3,75.3,0,KNOX2,KNOX2; KNOX1,KNOX1; Homeobox_KN,Homeobox KN domain;
ELK,ELK; HOMEOBOX_2,Homeodomain; HOMEOBOX ,CUFF.28092.1
(1221 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC59795 similar to UniRef100_A5Y4G8 Cluster: Class II K... 726 0.0
gnl|LJGI|TC71194 homologue to UniRef100_A5Y4G8 Cluster: Class II... 559 e-158
gnl|LJGI|TC80939 367 e-100
gnl|LJGI|TC79746 similar to UniRef100_A7QS15 Cluster: Chromosome... 206 2e-52
gnl|LJGI|TC61440 similar to UniRef100_A6XHG4 Cluster: Class II k... 127 2e-28
gnl|LJGI|TC81610 96 6e-19
gnl|LJGI|TC62989 similar to UniRef100_A7QS15 Cluster: Chromosome... 90 4e-17
gnl|LJGI|TC79136 similar to UniRef100_A9CR84 Cluster: Class 2 kn... 84 2e-15
gnl|LJGI|TC78918 similar to UniRef100_A7QKD4 Cluster: Chromosome... 80 4e-14
gnl|LJGI|BP055996 UniRef100_A5Y4G9 Cluster: Class II KNOX homeob... 66 6e-10
>gnl|LJGI|TC59795 similar to UniRef100_A5Y4G8 Cluster: Class II KNOX homeobox
transcription factor; n=1; Medicago truncatula|Rep:
Class II KNOX homeobox transcription factor - Medicago
truncatula (Barrel medic), partial (20%)
Length = 778
Score = 726 bits (366), Expect = 0.0
Identities = 369/370 (99%)
Strand = Plus / Plus
Query: 212 acgccaacacgaacttcctcaacctccaaaccgccaattccgactcctccgccgcccaat 271
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 409 acgccaacacgaacttcctcaacctccaaaccgccaattccgactccaccgccgcccaat 468
Query: 272 cctcctcccagtggctcgcccgccctgttctacacggcaaggttatcgacggcggcgctg 331
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 469 cctcctcccagtggctcgcccgccctgttctacacggcaaggttatcgacggcggcgctg 528
Query: 332 atatgtctcacgactctaccggcggcgagaagaccgagccggtgactgagggcggagctg 391
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 529 atatgtctcacgactctaccggcggcgagaagaccgagccggtgactgagggcggagctg 588
Query: 392 acggtggtttgatgagctggcagaatgctaagtgcaaggcggagattctgtcgcacccgc 451
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 589 acggtggtttgatgagctggcagaatgctaagtgcaaggcggagattctgtcgcacccgc 648
Query: 452 tgtacgaacagctgctttctgcacacgtggcgtgcttgcggatcgccacgccggtggacc 511
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 649 tgtacgaacagctgctttctgcacacgtggcgtgcttgcggatcgccacgccggtggacc 708
Query: 512 agttgcccaggatcgacgctcagctggcgcagtcgcagaatgtggtggccaagtactccg 571
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 709 agttgcccaggatcgacgctcagctggcgcagtcgcagaatgtggtggccaagtactccg 768
Query: 572 cctttggaca 581
||||||||||
Sbjct: 769 cctttggaca 778
Score = 367 bits (185), Expect = e-100
Identities = 185/185 (100%)
Strand = Plus / Plus
Query: 1 atggcgtacaaccaccaccaccacctctctcaagacctcccaattcaccatttctcagac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 198 atggcgtacaaccaccaccaccacctctctcaagacctcccaattcaccatttctcagac 257
Query: 61 caacaacaacaggaccaccataaccaccaccctctattggatgaccccaccaccaaacct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 258 caacaacaacaggaccaccataaccaccaccctctattggatgaccccaccaccaaacct 317
Query: 121 aactcctccgatcctcaccaaaccgcacccaattggctcaacaacgcccttctccgccct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 318 aactcctccgatcctcaccaaaccgcacccaattggctcaacaacgcccttctccgccct 377
Query: 181 cacta 185
|||||
Sbjct: 378 cacta 382
>gnl|LJGI|TC71194 homologue to UniRef100_A5Y4G8 Cluster: Class II KNOX homeobox
transcription factor; n=1; Medicago truncatula|Rep: Class
II KNOX homeobox transcription factor - Medicago
truncatula (Barrel medic), partial (21%)
Length = 723
Score = 559 bits (282), Expect = e-158
Identities = 282/282 (100%)
Strand = Plus / Plus
Query: 940 aaacatggttataaatcgaaaattgtggacataagagaggaaatcatgcgcaagagacga 999
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 aaacatggttataaatcgaaaattgtggacataagagaggaaatcatgcgcaagagacga 60
Query: 1000 gctgggaaacttcctggtgacaccacctctgtccttaaagcctggtggcaatcacattcc 1059
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 gctgggaaacttcctggtgacaccacctctgtccttaaagcctggtggcaatcacattcc 120
Query: 1060 aagtggccttaccctacagaggaggataaggcaaggttggtgcaggaaacgggtttgcag 1119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 aagtggccttaccctacagaggaggataaggcaaggttggtgcaggaaacgggtttgcag 180
Query: 1120 ttgaagcagatcaataactggtttatcaatcaaaggaagaggaactggcatagcaatgct 1179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ttgaagcagatcaataactggtttatcaatcaaaggaagaggaactggcatagcaatgct 240
Query: 1180 tcaacttctactgcgttgaagagcaagcgcaaaaggtcataa 1221
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 tcaacttctactgcgttgaagagcaagcgcaaaaggtcataa 282
>gnl|LJGI|TC80939
Length = 655
Score = 367 bits (185), Expect = e-100
Identities = 185/185 (100%)
Strand = Plus / Plus
Query: 1 atggcgtacaaccaccaccaccacctctctcaagacctcccaattcaccatttctcagac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 447 atggcgtacaaccaccaccaccacctctctcaagacctcccaattcaccatttctcagac 506
Query: 61 caacaacaacaggaccaccataaccaccaccctctattggatgaccccaccaccaaacct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 507 caacaacaacaggaccaccataaccaccaccctctattggatgaccccaccaccaaacct 566
Query: 121 aactcctccgatcctcaccaaaccgcacccaattggctcaacaacgcccttctccgccct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 567 aactcctccgatcctcaccaaaccgcacccaattggctcaacaacgcccttctccgccct 626
Query: 181 cacta 185
|||||
Sbjct: 627 cacta 631
>gnl|LJGI|TC79746 similar to UniRef100_A7QS15 Cluster: Chromosome undetermined
scaffold_155, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_155, whole
genome shotgun sequence - Vitis vinifera (Grape), partial
(59%)
Length = 1268
Score = 206 bits (104), Expect = 2e-52
Identities = 422/528 (79%)
Strand = Plus / Plus
Query: 644 tgttgctctgttctttcaaagaacaacttcaacaacatgtccgggtccatgcaatggaag 703
||||||| ||| | |||||||||||| | |||||||||||||| || ||||| |||||||
Sbjct: 384 tgttgctgtgtgccttcaaagaacaattgcaacaacatgtccgtgttcatgctatggaag 443
Query: 704 cagtgatggcttgttgggagattgagcagtctttacaaagtctgacaggagtttcacctg 763
||||||||||||||||||| | ||||||||| | ||||| ||||||| || || || |
Sbjct: 444 cagtgatggcttgttgggatctcgagcagtctctgcaaagcttgacaggtgtatctccag 503
Query: 764 gggaaggtacaggagcaacaatgtctgatgatgaagatgaccaagtagacagtgatgcca 823
| ||||| ||||| ||||||||||| || |||||||||||||| | ||| || ||||||
Sbjct: 504 gtgaaggaacaggtgcaacaatgtcagacgatgaagatgaccaggcagagagcaatgcca 563
Query: 824 atctgtttgatggtggtttggacggtcatgacaatatgggatttggccctcttgttccaa 883
| ||| || | | |||||||| ||||| | | || ||||| ||||| || || |
Sbjct: 564 acttgtacgaaagcagcatggacggtgctgacagtcttggctttggtcctctagtcccca 623
Query: 884 cagagaatgagaggtccctcatggagcgtgtgagacaggaactaaagcatgaattgaaac 943
| |||| ||| ||||| | |||||||| || || || || |||||||||| | ||||
Sbjct: 624 ctgagagtgaaaggtctttgatggagcgagtcaggcatgagttaaagcatgagctcaaac 683
Query: 944 atggttataaatcgaaaattgtggacataagagaggaaatcatgcgcaagagacgagctg 1003
| || || || ||| ||||||||||||||||| ||||| | || ||||| ||||| |
Sbjct: 684 agggatacaaggagaagattgtggacataagagaagaaattctacgaaagaggcgagccg 743
Query: 1004 ggaaacttcctggtgacaccacctctgtccttaaagcctggtggcaatcacattccaagt 1063
|||| || || || |||||||| ||| | | ||||| ||||||||| ||||||| || |
Sbjct: 744 ggaagctcccaggggacaccacatctcttttgaaagcttggtggcaagcacattcaaaat 803
Query: 1064 ggccttaccctacagaggaggataaggcaaggttggtgcaggaaacgggtttgcagttga 1123
|||| |||||||| ||||| || || || || |||||||||||||| || ||||| || |
Sbjct: 804 ggccctaccctactgaggaagacaaagctagattggtgcaggaaacagggttgcaattaa 863
Query: 1124 agcagatcaataactggtttatcaatcaaaggaagaggaactggcata 1171
||||||| ||||||||||| || ||||||||||| |||||||||||||
Sbjct: 864 agcagataaataactggttcataaatcaaaggaaaaggaactggcata 911
>gnl|LJGI|TC61440 similar to UniRef100_A6XHG4 Cluster: Class II knotted-like homeobox
protein; n=1; Prunus persica|Rep: Class II knotted-like
homeobox protein - Prunus persica (Peach), partial (29%)
Length = 855
Score = 127 bits (64), Expect = 2e-28
Identities = 190/232 (81%)
Strand = Plus / Plus
Query: 961 attgtggacataagagaggaaatcatgcgcaagagacgagctgggaaacttcctggtgac 1020
||||||||||||||||| ||||| | || |||||| |||||||||| || ||||| |||
Sbjct: 159 attgtggacataagagaagaaattctacgaaagagaagagctgggaagctccctggcgac 218
Query: 1021 accacctctgtccttaaagcctggtggcaatcacattccaagtggccttaccctacagag 1080
|||||||| | | ||| |||||||| |||||||| || |||||||| || || ||
Sbjct: 219 accacctcccttttgaaacaatggtggcagtcacattctaaatggccttatccaactgaa 278
Query: 1081 gaggataaggcaaggttggtgcaggaaacgggtttgcagttgaagcagatcaataactgg 1140
|| || ||||||||| ||||||||||||| || ||||| || |||||||| || ||||||
Sbjct: 279 gaagacaaggcaaggctggtgcaggaaacagggttgcaattaaagcagataaacaactgg 338
Query: 1141 tttatcaatcaaaggaagaggaactggcatagcaatgcttcaacttctactg 1192
|| || |||||||| || ||||| ||||||| |||| |||| |||||||||
Sbjct: 339 ttcattaatcaaagaaaaaggaattggcataccaatccttcctcttctactg 390
>gnl|LJGI|TC81610
Length = 576
Score = 95.6 bits (48), Expect = 6e-19
Identities = 48/48 (100%)
Strand = Plus / Minus
Query: 1169 atagcaatgcttcaacttctactgcgttgaagagcaagcgcaaaaggt 1216
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 576 atagcaatgcttcaacttctactgcgttgaagagcaagcgcaaaaggt 529
>gnl|LJGI|TC62989 similar to UniRef100_A7QS15 Cluster: Chromosome undetermined
scaffold_155, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_155,
whole genome shotgun sequence - Vitis vinifera (Grape),
partial (30%)
Length = 921
Score = 89.7 bits (45), Expect = 4e-17
Identities = 132/161 (81%)
Strand = Plus / Plus
Query: 637 tatgttttgttgctctgttctttcaaagaacaacttcaacaacatgtccgggtccatgca 696
|||||| || |||| ||| |||| ||||||||| | ||||| |||||||| || |||||
Sbjct: 761 tatgttctgctgctgtgtgcttttaaagaacaattgcaacagcatgtccgtgttcatgcc 820
Query: 697 atggaagcagtgatggcttgttgggagattgagcagtctttacaaagtctgacaggagtt 756
|||||||| || |||||||| |||||| | ||||||||| ||||||| |||| || ||
Sbjct: 821 atggaagctgttatggcttgctgggagctcgagcagtctctacaaagcttgaccggtgta 880
Query: 757 tcacctggggaaggtacaggagcaacaatgtctgatgatga 797
|| || || || || || || ||||||||||||||||||||
Sbjct: 881 tctccgggtgagggaacgggtgcaacaatgtctgatgatga 921
Score = 69.9 bits (35), Expect = 4e-11
Identities = 116/143 (81%)
Strand = Plus / Plus
Query: 427 aaggcggagattctgtcgcacccgctgtacgaacagctgctttctgcacacgtggcgtgc 486
|||||||| |||||| || ||||||||||| |||||||| || || || || ||||
Sbjct: 563 aaggcggacattctgggacatccgctgtacgaccagctgctgtcggcgcatgtttcgtgt 622
Query: 487 ttgcggatcgccacgccggtggaccagttgcccaggatcgacgctcagctggcgcagtcg 546
||| ||||||| ||||||||||||||| | || |||||||||| |||||| |||| ||
Sbjct: 623 ttgaggatcgcgacgccggtggaccagcttcctcggatcgacgcgcagctgcagcaggcg 682
Query: 547 cagaatgtggtggccaagtactc 569
||| ||||||| |||||||||
Sbjct: 683 cagcgcgtggtggacaagtactc 705
>gnl|LJGI|TC79136 similar to UniRef100_A9CR84 Cluster: Class 2 knotted1-like protein;
n=1; Nicotiana tabacum|Rep: Class 2 knotted1-like protein
- Nicotiana tabacum (Common tobacco), partial (19%)
Length = 599
Score = 83.8 bits (42), Expect = 2e-15
Identities = 90/106 (84%)
Strand = Plus / Plus
Query: 1087 aaggcaaggttggtgcaggaaacgggtttgcagttgaagcagatcaataactggtttatc 1146
||||||||| ||||||||||||| || ||||| || |||||||| || |||||||| ||
Sbjct: 156 aaggcaaggctggtgcaggaaacagggttgcaattaaagcagataaacaactggttcatt 215
Query: 1147 aatcaaaggaagaggaactggcatagcaatgcttcaacttctactg 1192
|||||||| || ||||| ||||||| |||| |||| |||||||||
Sbjct: 216 aatcaaagaaaaaggaattggcataccaatccttcctcttctactg 261
>gnl|LJGI|TC78918 similar to UniRef100_A7QKD4 Cluster: Chromosome chr2 scaffold_112,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr2 scaffold_112, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (91%)
Length = 1456
Score = 79.8 bits (40), Expect = 4e-14
Identities = 97/116 (83%)
Strand = Plus / Plus
Query: 1060 aagtggccttaccctacagaggaggataaggcaaggttggtgcaggaaacgggtttgcag 1119
|||||||||||||| ||||| || || ||||||| | ||| |||| ||||||||||||
Sbjct: 936 aagtggccttacccaacagaagatgacaaggcaaaacttgtggaggagacgggtttgcag 995
Query: 1120 ttgaagcagatcaataactggtttatcaatcaaaggaagaggaactggcatagcaa 1175
|||||||||| ||||| ||||| ||||| |||||||| | |||||||| |||||
Sbjct: 996 ctgaagcagattaataattggttcatcaaccaaaggaaacgcaactggcacagcaa 1051
>gnl|LJGI|BP055996 UniRef100_A5Y4G9 Cluster: Class II KNOX homeobox transcription
factor; n=1; Medicago truncatula|Rep: Class II KNOX
homeobox transcription factor - Medicago truncatula
(Barrel medic), partial (14%)
Length = 546
Score = 65.9 bits (33), Expect = 6e-10
Identities = 63/73 (86%)
Strand = Plus / Minus
Query: 1103 aggaaacgggtttgcagttgaagcagatcaataactggtttatcaatcaaaggaagagga 1162
|||| |||||||||||| |||||||||| ||||| ||||| ||||| |||||||| | |
Sbjct: 537 aggagacgggtttgcagctgaagcagattaataattggttcatcaaccaaaggaaacgca 478
Query: 1163 actggcatagcaa 1175
||||||| |||||
Sbjct: 477 actggcacagcaa 465