Miyakogusa Predicted Gene
- Lj1g3v1852290.2
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj1g3v1852290.2 Non Chatacterized Hit- tr|E1ZCG5|E1ZCG5_CHLVA
Putative uncharacterized protein OS=Chlorella
variabil,39.23,0.00000000001,NEUROCHONDRIN-RELATED,NULL;
NEUROCHONDRIN,Neurochondrin; Neurochondrin,NULL; seg,NULL,CUFF.28084.2
(489 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC63768 weakly similar to UniRef100_A7P602 Cluster: Chr... 858 0.0
gnl|LJGI|TC66670 similar to UniRef100_Q8VZF7 Cluster: AT4g32050/... 795 0.0
gnl|LJGI|FS319453 similar to UniRef100_A7P111 Cluster: Chromosom... 88 6e-17
gnl|LJGI|TC70541 similar to UniRef100_A7P111 Cluster: Chromosome... 88 6e-17
>gnl|LJGI|TC63768 weakly similar to UniRef100_A7P602 Cluster: Chromosome chr4
scaffold_6, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr4 scaffold_6, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (26%)
Length = 805
Score = 858 bits (433), Expect = 0.0
Identities = 475/489 (97%)
Strand = Plus / Plus
Query: 1 atggaaccaaatcaagaacagagtccgaatctggaggagtgcttgaaattgctgaaagga 60
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 169 atggaaccaaatcaagaacagagtccgaatcttgaggagtgcttgaaattgctgaaagga 228
Query: 61 gagcaagacgaacaacgtcttgctgggcttcttctggtcaccaagttctgcaaagctgat 120
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 229 gagcgagacgaacaacgtcttgctgggcttcttctggtcaccaagttctgcaaagctgat 288
Query: 121 gatcgctcctcactctccagggtttatgatgctgttggccctgtctttcttgatcggctt 180
|||| ||||||||||| ||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 289 gatcactcctcactctgcagggtttatgatgctgttggccctatctttcttgatcggctt 348
Query: 181 ctcagaactggcatgggaagagggaccatatcaagtggcggaggcaataatcgtgatgca 240
||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||
Sbjct: 349 ctcagaactggcatgggaagaggaaccatatcaagtggcagaggcaataatcgtgatgca 408
Query: 241 tatttgagcgtagcggttacagttctttctaccttttgtcgtgttccagagattgcttcc 300
||||||||| |||| |||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 409 tatttgagcctagcagttacagttctttctaccttttctcgtgttccagagattgcttcc 468
Query: 301 tcagaagacatggttgtcaagatcccactaatattggaagtaatgtccacgcaatctggc 360
|||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||
Sbjct: 469 tcagaagacatggttgtccagattccactaatattggaagtaatgtccacgcaatctggc 528
Query: 361 tcgtctgctcttgaagaatgctatgagtttttatacttggtttcaactgcttcagaaaat 420
||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 529 tcgtctgttcttgaagaatgctatgagtttttatacttagtttcaactgcttcagaaaat 588
Query: 421 ggactcatgagattttatgaatctaaaggcatcaagatactagcttctcagatgtcttct 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 589 ggactcatgagattttatgaatctaaaggcatcaagatactagcttctcagatgtcttct 648
Query: 481 ctgcaagat 489
|||||||||
Sbjct: 649 ctgcaagat 657
>gnl|LJGI|TC66670 similar to UniRef100_Q8VZF7 Cluster: AT4g32050/F10N7_130; n=1;
Arabidopsis thaliana|Rep: AT4g32050/F10N7_130 -
Arabidopsis thaliana (Mouse-ear cress), partial (17%)
Length = 971
Score = 795 bits (401), Expect = 0.0
Identities = 401/401 (100%)
Strand = Plus / Plus
Query: 1 atggaaccaaatcaagaacagagtccgaatctggaggagtgcttgaaattgctgaaagga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 571 atggaaccaaatcaagaacagagtccgaatctggaggagtgcttgaaattgctgaaagga 630
Query: 61 gagcaagacgaacaacgtcttgctgggcttcttctggtcaccaagttctgcaaagctgat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 631 gagcaagacgaacaacgtcttgctgggcttcttctggtcaccaagttctgcaaagctgat 690
Query: 121 gatcgctcctcactctccagggtttatgatgctgttggccctgtctttcttgatcggctt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 691 gatcgctcctcactctccagggtttatgatgctgttggccctgtctttcttgatcggctt 750
Query: 181 ctcagaactggcatgggaagagggaccatatcaagtggcggaggcaataatcgtgatgca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 751 ctcagaactggcatgggaagagggaccatatcaagtggcggaggcaataatcgtgatgca 810
Query: 241 tatttgagcgtagcggttacagttctttctaccttttgtcgtgttccagagattgcttcc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 811 tatttgagcgtagcggttacagttctttctaccttttgtcgtgttccagagattgcttcc 870
Query: 301 tcagaagacatggttgtcaagatcccactaatattggaagtaatgtccacgcaatctggc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 871 tcagaagacatggttgtcaagatcccactaatattggaagtaatgtccacgcaatctggc 930
Query: 361 tcgtctgctcttgaagaatgctatgagtttttatacttggt 401
|||||||||||||||||||||||||||||||||||||||||
Sbjct: 931 tcgtctgctcttgaagaatgctatgagtttttatacttggt 971
>gnl|LJGI|FS319453 similar to UniRef100_A7P111 Cluster: Chromosome chr19 scaffold_4,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr19 scaffold_4, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (12%)
Length = 672
Score = 87.7 bits (44), Expect = 6e-17
Identities = 47/48 (97%)
Strand = Plus / Plus
Query: 442 tctaaaggcatcaagatactagcttctcagatgtcttctctgcaagat 489
||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 125 tctaaaggcatcaagatactagcttctcagatgtcttctgtgcaagat 172
>gnl|LJGI|TC70541 similar to UniRef100_A7P111 Cluster: Chromosome chr19 scaffold_4,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr19 scaffold_4, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (12%)
Length = 969
Score = 87.7 bits (44), Expect = 6e-17
Identities = 47/48 (97%)
Strand = Plus / Plus
Query: 442 tctaaaggcatcaagatactagcttctcagatgtcttctctgcaagat 489
||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 405 tctaaaggcatcaagatactagcttctcagatgtcttctgtgcaagat 452