Miyakogusa Predicted Gene

Lj1g3v1852280.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj1g3v1852280.1 tr|A9TFH4|A9TFH4_PHYPA Predicted protein
OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_92084
,26.62,0.0000000000004,seg,NULL; Neurochondrin,NULL; coiled-coil,NULL;
NEUROCHONDRIN-RELATED,NULL; NEUROCHONDRIN,Neurochond,CUFF.28079.1
         (858 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC65229 weakly similar to UniRef100_A7P602 Cluster: Chr...   720   0.0  

>gnl|LJGI|TC65229 weakly similar to UniRef100_A7P602 Cluster: Chromosome chr4
           scaffold_6, whole genome shotgun sequence; n=1; Vitis
           vinifera|Rep: Chromosome chr4 scaffold_6, whole genome
           shotgun sequence - Vitis vinifera (Grape), partial (27%)
          Length = 743

 Score =  720 bits (363), Expect = 0.0
 Identities = 372/375 (99%)
 Strand = Plus / Plus

                                                                       
Query: 480 tttagggtatatgctttctgttgaaggggaagatgaacaaaggcctttctactctgtctg 539
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1   tttagggtatatgctttctgttgaaggggaagatgaacaaaggcctttctactctgtctg 60

                                                                       
Query: 540 ctttctgctacctatgttgtgtcaaattactatgaaggttgaagggtgcaaagctctagc 599
           |||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||
Sbjct: 61  ctttctgctacctatgttgtgtcaaattactatgaaggttgaagggtgtaaagctctggc 120

                                                                       
Query: 600 ttcttgtggagaacttaaggctgttttagattgcctcagtaatttaattgggtccaatgg 659
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 ttcttgtggagaacttaaggctgttttagattgcctcagtaatttaattgggtccaatgg 180

                                                                       
Query: 660 ttatacggttgaggatagcagttgcatcttcttggcatgtgatataataatgaaccttct 719
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ttatacggttgaggatagcagttgcatcttcttggcatgtgatataataatgaaccttct 240

                                                                       
Query: 720 aatgaagaaagacaaagtgcagttgacattagatggatcagtttttgtagatcttcttaa 779
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 aatgaagaaagacaaagtgcagttgacattagatggatcagtttttgtagatcttcttaa 300

                                                                       
Query: 780 agcattggcttattggtcagaaaatactgatgacatgtcaagtatgatgatgactgcaag 839
           |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 301 agcattggcttattggtcagaaaatactgatgacatgtcaagtatgatgatggctgcaag 360

                          
Query: 840 catttgtgcactcat 854
           |||||||||||||||
Sbjct: 361 catttgtgcactcat 375