Miyakogusa Predicted Gene
- Lj1g3v1820910.3
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj1g3v1820910.3 tr|G7J9W2|G7J9W2_MEDTR Chromatin remodeling
complex subunit OS=Medicago truncatula GN=MTR_3g106210
P,88.95,0,seg,NULL; SNF2_N,SNF2-related; Chromo,Chromo domain;
Helicase_C,Helicase, C-terminal; CHROMO_2,Chrom,CUFF.28143.3
(2283 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|DC598611 homologue to UniRef100_A7P5Y0 Cluster: Chromos... 1074 0.0
>gnl|LJGI|DC598611 homologue to UniRef100_A7P5Y0 Cluster: Chromosome chr4 scaffold_6,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr4 scaffold_6, whole genome shotgun sequence
- Vitis vinifera (Grape), partial (26%)
Length = 546
Score = 1074 bits (542), Expect = 0.0
Identities = 545/546 (99%)
Strand = Plus / Plus
Query: 1505 acttggatgaactttttatgcttatgcacttccttgatgctgggaagtttggaagtttag 1564
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 acttggatgaactttttatgcttatgcacttccttgatgctgggaagtttggaagtttag 60
Query: 1565 aggagttccaggaagaatttaaggacatcaatcaagaggaacagatttcaaggcttcata 1624
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 61 aggagttccaggaagaatttagggacatcaatcaagaggaacagatttcaaggcttcata 120
Query: 1625 aaatgttggccccacatcttctgcgaagagtgaagaaagatgtcatgaaggaactaccac 1684
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 aaatgttggccccacatcttctgcgaagagtgaagaaagatgtcatgaaggaactaccac 180
Query: 1685 ccaaaaaggaacttatcctacgtgttgaattgagcagcaaacagaaagaatattataagg 1744
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ccaaaaaggaacttatcctacgtgttgaattgagcagcaaacagaaagaatattataagg 240
Query: 1745 caattttgactcgcaattatcagttattaactcgtcgtggtggtgcacagatttctctta 1804
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 caattttgactcgcaattatcagttattaactcgtcgtggtggtgcacagatttctctta 300
Query: 1805 ttaatgttgttatggaactgcgcaagctctgttgtcatcctttcatgttagaaggagttg 1864
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 ttaatgttgttatggaactgcgcaagctctgttgtcatcctttcatgttagaaggagttg 360
Query: 1865 aaccagatattgacgatccaaaagaattccacaaacagctgctggaatcgtcagggaaat 1924
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 aaccagatattgacgatccaaaagaattccacaaacagctgctggaatcgtcagggaaat 420
Query: 1925 tgcaattgctggacaagatgatggtaaagcttaaagagcaagggcatagagtcctcatat 1984
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 tgcaattgctggacaagatgatggtaaagcttaaagagcaagggcatagagtcctcatat 480
Query: 1985 atacccaatttcagcacatgctggacttgcttgaagattactgttcttacaagaaatggc 2044
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 atacccaatttcagcacatgctggacttgcttgaagattactgttcttacaagaaatggc 540
Query: 2045 tgtatg 2050
||||||
Sbjct: 541 tgtatg 546