Miyakogusa Predicted Gene
- Lj1g3v1820910.2
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj1g3v1820910.2 Non Chatacterized Hit- tr|I1K8P5|I1K8P5_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.49070
PE,86.13,0,coiled-coil,NULL; no description,Zinc finger,
RING/FYVE/PHD-type; no description,NULL; SNF2_N,SNF2-r,CUFF.28143.2
(4281 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|GO011452 similar to UniRef100_A7P5Y1 Cluster: Chromosom... 1078 0.0
gnl|LJGI|DC598611 homologue to UniRef100_A7P5Y0 Cluster: Chromos... 1074 0.0
>gnl|LJGI|GO011452 similar to UniRef100_A7P5Y1 Cluster: Chromosome chr4 scaffold_6,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr4 scaffold_6, whole genome shotgun sequence
- Vitis vinifera (Grape), partial (15%)
Length = 570
Score = 1078 bits (544), Expect = 0.0
Identities = 567/575 (98%), Gaps = 6/575 (1%)
Strand = Plus / Plus
Query: 3019 gattacggaacccttttcttgtctcatattgctgaagatataactgattcccttacattc 3078
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2 gattacgtaacccttttcttgtctcatattgctgaagatataactgattcccttacattc 61
Query: 3079 acagatggtgttccaaaagaaggactccgaattcaagatgtgcttgttaggattgcagtt 3138
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 62 acagatggtgttccaaaagaaggactccgaattcaagatgtgcttgttaggattgcagtt 121
Query: 3139 cttctcttgataagggacaaagtgaggtttgcatcagaacatcctcaaactccactgttt 3198
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122 cttctcttgataagggacaaagtgaggtttgcatcagaacatcctcaaactccactgttt 181
Query: 3199 tcggatgacatattatcacgctattcaggactgaagggtgcaaagatatggaaggaagag 3258
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 182 tcggatgacatattatcacgctattcaggactgaagggtgcaaagatatggaaggaagag 241
Query: 3259 catgatttagttctactgcgtgctgtgttgaaacatgggtatggaaggtggcaagctatt 3318
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 242 catgatttagttctactgcgtgctgtgttgaaacatgggtatggaaggtggcaagctatt 301
Query: 3319 gttgatgataaggatctgaagattcaggagctcatctgtcaggagttgaatcttcccacg 3378
|||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 302 gttgat------gatctgaagattcaggagctcatctgtcaggagttgaatcttcccacg 355
Query: 3379 ataaatttgccattaccaggacaagttggctctcaggcacaaaatggtgcaaatttgaca 3438
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 356 ataaatttgccattaccaggacaagttggctctcaggcacaaaatggtgcaaatttgaca 415
Query: 3439 agtgcagaagtacctgccaatcaatccagggaaaatggtgggagtgacataacagctgat 3498
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 416 agtgcagaagtacctgccaatcaatccagggaaaatggtgggagtgacataacagctgat 475
Query: 3499 ggtgcacagggttcgggtgatgctaagaaccaaccacagttatatcaagactcttccata 3558
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 476 gttgcacagggttcgggtgatgctaagaaccaaccacagttatatcaagactcttccata 535
Query: 3559 ttatatcattttagagacatgcagagaagacaggt 3593
|||||||||||||||||||||||||||||||||||
Sbjct: 536 ttatatcattttagagacatgcagagaagacaggt 570
>gnl|LJGI|DC598611 homologue to UniRef100_A7P5Y0 Cluster: Chromosome chr4 scaffold_6,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr4 scaffold_6, whole genome shotgun sequence
- Vitis vinifera (Grape), partial (26%)
Length = 546
Score = 1074 bits (542), Expect = 0.0
Identities = 545/546 (99%)
Strand = Plus / Plus
Query: 1409 acttggatgaactttttatgcttatgcacttccttgatgctgggaagtttggaagtttag 1468
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 acttggatgaactttttatgcttatgcacttccttgatgctgggaagtttggaagtttag 60
Query: 1469 aggagttccaggaagaatttaaggacatcaatcaagaggaacagatttcaaggcttcata 1528
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 61 aggagttccaggaagaatttagggacatcaatcaagaggaacagatttcaaggcttcata 120
Query: 1529 aaatgttggccccacatcttctgcgaagagtgaagaaagatgtcatgaaggaactaccac 1588
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 aaatgttggccccacatcttctgcgaagagtgaagaaagatgtcatgaaggaactaccac 180
Query: 1589 ccaaaaaggaacttatcctacgtgttgaattgagcagcaaacagaaagaatattataagg 1648
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ccaaaaaggaacttatcctacgtgttgaattgagcagcaaacagaaagaatattataagg 240
Query: 1649 caattttgactcgcaattatcagttattaactcgtcgtggtggtgcacagatttctctta 1708
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 caattttgactcgcaattatcagttattaactcgtcgtggtggtgcacagatttctctta 300
Query: 1709 ttaatgttgttatggaactgcgcaagctctgttgtcatcctttcatgttagaaggagttg 1768
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 ttaatgttgttatggaactgcgcaagctctgttgtcatcctttcatgttagaaggagttg 360
Query: 1769 aaccagatattgacgatccaaaagaattccacaaacagctgctggaatcgtcagggaaat 1828
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 aaccagatattgacgatccaaaagaattccacaaacagctgctggaatcgtcagggaaat 420
Query: 1829 tgcaattgctggacaagatgatggtaaagcttaaagagcaagggcatagagtcctcatat 1888
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 tgcaattgctggacaagatgatggtaaagcttaaagagcaagggcatagagtcctcatat 480
Query: 1889 atacccaatttcagcacatgctggacttgcttgaagattactgttcttacaagaaatggc 1948
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 atacccaatttcagcacatgctggacttgcttgaagattactgttcttacaagaaatggc 540
Query: 1949 tgtatg 1954
||||||
Sbjct: 541 tgtatg 546