Miyakogusa Predicted Gene
- Lj1g3v1819850.2
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj1g3v1819850.2 tr|Q6Z1L1|Q6Z1L1_ORYSJ Os08g0278900 protein
OS=Oryza sativa subsp. japonica GN=OSJNBa0091M20.30
PE=4,29.63,0.038,MIR,MIR motif; no description,NULL; seg,NULL; Domain
in ryanodine and inositol trisphospha,MIR motif,CUFF.29098.2
(684 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC73948 similar to UniRef100_Q93ZE8 Cluster: Stromal ce... 1122 0.0
gnl|LJGI|BP058306 similar to UniRef100_A7P5X3 Cluster: Chromosom... 98 9e-20
>gnl|LJGI|TC73948 similar to UniRef100_Q93ZE8 Cluster: Stromal cell-derived factor
2-like protein precursor; n=2; Arabidopsis thaliana|Rep:
Stromal cell-derived factor 2-like protein precursor -
Arabidopsis thaliana (Mouse-ear cress), partial (96%)
Length = 1254
Score = 1122 bits (566), Expect = 0.0
Identities = 566/566 (100%)
Strand = Plus / Plus
Query: 119 aaggcgtcgaggtgcaggttacttatggatccgttttgaagcttatgcacgagaagacga 178
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 417 aaggcgtcgaggtgcaggttacttatggatccgttttgaagcttatgcacgagaagacga 476
Query: 179 aattccggttgcattctcatgatgtgccgtatggttctggaagtggacagcaatctgtta 238
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 477 aattccggttgcattctcatgatgtgccgtatggttctggaagtggacagcaatctgtta 536
Query: 239 ctggttttcctgatgttgatgatgccaacagttactggattgtgaggcctgagccaggaa 298
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 537 ctggttttcctgatgttgatgatgccaacagttactggattgtgaggcctgagccaggaa 596
Query: 299 ctggtgctaaacaaggtgatgccataaaaagtggcaccatcattagattgcagcatatga 358
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 597 ctggtgctaaacaaggtgatgccataaaaagtggcaccatcattagattgcagcatatga 656
Query: 359 ggaccaggaagtggctgcacagccatttgcatgcatccccaatatcaggcaatctcgagg 418
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 657 ggaccaggaagtggctgcacagccatttgcatgcatccccaatatcaggcaatctcgagg 716
Query: 419 tgagttgctttggaggagagtctgaatctgacactggagactattggaaggttttcatag 478
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 717 tgagttgctttggaggagagtctgaatctgacactggagactattggaaggttttcatag 776
Query: 479 aaggaagtggaaagacttggaagcaggatcagaagattcggcttcagcatattgacaccg 538
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 777 aaggaagtggaaagacttggaagcaggatcagaagattcggcttcagcatattgacaccg 836
Query: 539 gaggctatctacatagtcatgataagaaatacagtcggattgctgggggacagcaggagg 598
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 837 gaggctatctacatagtcatgataagaaatacagtcggattgctgggggacagcaggagg 896
Query: 599 tatgtgcagttcgtgaaaagcgtgcggacaatgtctggttggcagctgaaggtgtctatc 658
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 897 tatgtgcagttcgtgaaaagcgtgcggacaatgtctggttggcagctgaaggtgtctatc 956
Query: 659 ttccggttactgaaagcaaatagatc 684
||||||||||||||||||||||||||
Sbjct: 957 ttccggttactgaaagcaaatagatc 982
>gnl|LJGI|BP058306 similar to UniRef100_A7P5X3 Cluster: Chromosome chr4 scaffold_6,
whole genome shotgun sequence; n=2; Vitis vinifera|Rep:
Chromosome chr4 scaffold_6, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (17%)
Length = 357
Score = 97.6 bits (49), Expect = 9e-20
Identities = 64/69 (92%)
Strand = Plus / Minus
Query: 594 ggaggtatgtgcagttcgtgaaaagcgtgcggacaatgtctggttggcagctgaaggtgt 653
|||||||||| | ||||||||||||||||||||| | ||||||||||| |||||||||||
Sbjct: 340 ggaggtatgtcccgttcgtgaaaagcgtgcggaccaagtctggttggccgctgaaggtgt 281
Query: 654 ctatcttcc 662
|||||||||
Sbjct: 280 ctatcttcc 272