Miyakogusa Predicted Gene

Lj1g3v1812230.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj1g3v1812230.1 tr|G7J9T7|G7J9T7_MEDTR Pentatricopeptide
repeat-containing protein OS=Medicago truncatula GN=MTR_3g1,77.94,0,no
description,Tetratricopeptide-like helical; PPR: pentatricopeptide
repeat domain,Pentatricopeptid,CUFF.28013.1
         (3358 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|AV421386 weakly similar to UniRef100_A7P654 Cluster: Ch...   561   e-158

>gnl|LJGI|AV421386 weakly similar to UniRef100_A7P654 Cluster: Chromosome chr4
            scaffold_6, whole genome shotgun sequence; n=1; Vitis
            vinifera|Rep: Chromosome chr4 scaffold_6, whole genome
            shotgun sequence - Vitis vinifera (Grape), partial (9%)
          Length = 299

 Score =  561 bits (283), Expect = e-158
 Identities = 295/299 (98%)
 Strand = Plus / Plus

                                                                        
Query: 2599 aatattatcatctctgcccttgtgaaatctaatagcctaaataaggcattagatttatat 2658
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1    aatattatcatctctgcccttgtgaaatctaatagcctaaataaggcattagatttatat 60

                                                                        
Query: 2659 tatgaactcattagtggtgatttctctcccactccctgcacatatggccctcttatagat 2718
            ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 61   tatgaactcattagtggtgatttctctcccactccctgcacatatggcccttttatagat 120

                                                                        
Query: 2719 ggtcttttaaaggctgaaagatgtgatgaagcactgaagttttttgaggagatgttggac 2778
            || | |||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 121  ggacctttaaaggctgaaagatgcgatgaagcactgaagttttttgaggagatgttggac 180

                                                                        
Query: 2779 tatcaatgcaagcccaactctgctatttacaatattctcatcaatggatttgggaaagca 2838
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181  tatcaatgcaagcccaactctgctatttacaatattctcatcaatggatttgggaaagca 240

                                                                       
Query: 2839 ggtaaaattgatattgcttgtgattttttcaaaaggatggttaaggaaggaataaggcc 2897
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241  ggtaaaattgatattgcttgtgattttttcaaaaggatggttaaggaaggaataaggcc 299