Miyakogusa Predicted Gene
- Lj1g3v1798690.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj1g3v1798690.1 NODE_18454_length_1724_cov_23.187935.path1.1
(1234 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC60187 similar to UniRef100_A7P553 Cluster: Chromosome... 1223 0.0
gnl|LJGI|TC66984 weakly similar to UniRef100_Q8GSA3 Cluster: F-b... 874 0.0
>gnl|LJGI|TC60187 similar to UniRef100_A7P553 Cluster: Chromosome chr4 scaffold_6,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr4 scaffold_6, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (21%)
Length = 747
Score = 1223 bits (617), Expect = 0.0
Identities = 620/621 (99%)
Strand = Plus / Plus
Query: 1 atggaatgcattggcagaagtgtgagtttgaagagaaagtcaccagaaaatggagataat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 127 atggaatgcattggcagaagtgtgagtttgaagagaaagtcaccagaaaatggagataat 186
Query: 61 ccactcttcagcaacttttctctggatgaccttaatgaagatctgtttgaaaggatactt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 187 ccactcttcagcaacttttctctggatgaccttaatgaagatctgtttgaaaggatactt 246
Query: 121 tcatggctgccaacttccacattcttccgcggtacttcggtgtgcaaaagatggaaatca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 247 tcatggctgccaacttccacattcttccgcggtacttcggtgtgcaaaagatggaaatca 306
Query: 181 gttgctgcttctaccagtttcaagcatgcctgctctcaaattccttcaagggaaccttgg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 307 gttgctgcttctaccagtttcaagcatgcctgctctcaaattccttcaagggaaccttgg 366
Query: 241 tttctcatggttgctcccaacctcaaccaatctgttatctttgacattgctgaaagctct 300
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 367 tttctcatggttgctcccaacctcaaccaatctgttatctttgacactgctgaaagctct 426
Query: 301 tggaaaagactcaaccatccacctcttctgcatgaagaatctaaccaaagttgcatgccg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 427 tggaaaagactcaaccatccacctcttctgcatgaagaatctaaccaaagttgcatgccg 486
Query: 361 gttgcatcctccggcggcttgatttgccacagaaaattatcaggagacttcattgtgagc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 487 gttgcatcctccggcggcttgatttgccacagaaaattatcaggagacttcattgtgagc 546
Query: 421 aatcctgtgacaggatcttgcagtgaactccctccactgcacatttcatctcagaaccaa 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 547 aatcctgtgacaggatcttgcagtgaactccctccactgcacatttcatctcagaaccaa 606
Query: 481 cctctcaatgccattgtgatgagaacagcttcaaaagaccaactctccttcagaattgtg 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 607 cctctcaatgccattgtgatgagaacagcttcaaaagaccaactctccttcagaattgtg 666
Query: 541 ttagtcttcggcgagcttccaaatctcgtgtttaaagtctacaattcaagctctggctgt 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 667 ttagtcttcggcgagcttccaaatctcgtgtttaaagtctacaattcaagctctggctgt 726
Query: 601 tgggaaaatgagactgcactg 621
|||||||||||||||||||||
Sbjct: 727 tgggaaaatgagactgcactg 747
>gnl|LJGI|TC66984 weakly similar to UniRef100_Q8GSA3 Cluster: F-box protein family,
AtFBX13-like protein; n=1; Oryza sativa Japonica
Group|Rep: F-box protein family, AtFBX13-like protein -
Oryza sativa subsp. japonica (Rice), partial (28%)
Length = 744
Score = 874 bits (441), Expect = 0.0
Identities = 441/441 (100%)
Strand = Plus / Plus
Query: 794 atcttagctcctcagggacagtggtagcttgcaatttgacaagaaagtgcttctttgagc 853
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4 atcttagctcctcagggacagtggtagcttgcaatttgacaagaaagtgcttctttgagc 63
Query: 854 atcccaggttgttgccagtttttagtgagtactccattgatgttgtggagtgtaatgggg 913
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 64 atcccaggttgttgccagtttttagtgagtactccattgatgttgtggagtgtaatgggg 123
Query: 914 agatgctgattgttttgttatcagagttcttggaaactgctagtcttagggtgtggaaat 973
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 124 agatgctgattgttttgttatcagagttcttggaaactgctagtcttagggtgtggaaat 183
Query: 974 atgatgagggttggcaccagattgcagcaatgccagtggctaattcccatgagtggtttg 1033
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 184 atgatgagggttggcaccagattgcagcaatgccagtggctaattcccatgagtggtttg 243
Query: 1034 ggaaaaaggctgatataaactgtgtaggagctggtaaccagatttttgtgtgcttgaact 1093
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 244 ggaaaaaggctgatataaactgtgtaggagctggtaaccagatttttgtgtgcttgaact 303
Query: 1094 cccctgaaatatgcacttatgttctgtgtgatttggagaccaacaagtgggttgaattgc 1153
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 304 cccctgaaatatgcacttatgttctgtgtgatttggagaccaacaagtgggttgaattgc 363
Query: 1154 caaaatgctgcctaaatggtgaagtcatggacttcatgtctgctttttcatttgagccta 1213
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 364 caaaatgctgcctaaatggtgaagtcatggacttcatgtctgctttttcatttgagccta 423
Query: 1214 gaatagaggcttctgtgtgaa 1234
|||||||||||||||||||||
Sbjct: 424 gaatagaggcttctgtgtgaa 444