Miyakogusa Predicted Gene

Lj1g3v1798560.1

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj1g3v1798560.1 Non Chatacterized Hit- tr|I1KS42|I1KS42_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.45963
PE,73.96,0,PORR,Plant organelle RNA recognition domain; SUBFAMILY NOT
NAMED,NULL; FAMILY NOT NAMED,NULL; coiled,CUFF.27953.1
         (1337 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC78737 similar to UniRef100_A7P4W2 Cluster: Chromosome...  1608   0.0  

>gnl|LJGI|TC78737 similar to UniRef100_A7P4W2 Cluster: Chromosome chr4 scaffold_6,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr4 scaffold_6, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (52%)
          Length = 869

 Score = 1608 bits (811), Expect = 0.0
 Identities = 811/811 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgcaggtagcttcaggaaccactgaacggtggttgaggacaataaccggttgctccaac 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 48  atgcaggtagcttcaggaaccactgaacggtggttgaggacaataaccggttgctccaac 107

                                                                       
Query: 61  cgccactggcaccaccactccctccgatggatgacaaccagcaagagagtccaagaccgg 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 108 cgccactggcaccaccactccctccgatggatgacaaccagcaagagagtccaagaccgg 167

                                                                       
Query: 121 agcaagaagaagagggttcacgagctcgaagaagcaacagagaaatggaagatagtctcc 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 168 agcaagaagaagagggttcacgagctcgaagaagcaacagagaaatggaagatagtctcc 227

                                                                       
Query: 181 aaaatcgtcttcctcatggagcttctcaagcaggaacccgagatggtaacccccattcgc 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 228 aaaatcgtcttcctcatggagcttctcaagcaggaacccgagatggtaacccccattcgc 287

                                                                       
Query: 241 accctcgaacagtaccgcaagcagatcaacctccccaaaccgcaccgcgtctccgatttc 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 288 accctcgaacagtaccgcaagcagatcaacctccccaaaccgcaccgcgtctccgatttc 347

                                                                       
Query: 301 ctccgcaagacgccgaagctcttcgaactgtaccaggaccggaagggaacgtggtggtgc 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 348 ctccgcaagacgccgaagctcttcgaactgtaccaggaccggaagggaacgtggtggtgc 407

                                                                       
Query: 361 gggttgactgagagagcagagaatttgatggaagaacacgaaagggtcgtcgaggaaaat 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 408 gggttgactgagagagcagagaatttgatggaagaacacgaaagggtcgtcgaggaaaat 467

                                                                       
Query: 421 gcggataaagctgctgaacatgttactagggttttgatgatgtcgctggataaacggctt 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 468 gcggataaagctgctgaacatgttactagggttttgatgatgtcgctggataaacggctt 527

                                                                       
Query: 481 ccggtggataagattgcgcatttccggcgagattttgggttgccgatggatttcagaaca 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 528 ccggtggataagattgcgcatttccggcgagattttgggttgccgatggatttcagaaca 587

                                                                       
Query: 541 cgctgggtgaaccagtatcctgagcttttcaaattggtgaagtctcttgatgatggggtt 600
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 588 cgctgggtgaaccagtatcctgagcttttcaaattggtgaagtctcttgatgatggggtt 647

                                                                       
Query: 601 gagtttttggagctggtttcttggaaccctaattgggcaatcactgagcttgagaagaag 660
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 648 gagtttttggagctggtttcttggaaccctaattgggcaatcactgagcttgagaagaag 707

                                                                       
Query: 661 gtagctggaaacgaaaacgaaagcggcgaaagcgcgaattcgcatacacctggtgtgcta 720
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 708 gtagctggaaacgaaaacgaaagcggcgaaagcgcgaattcgcatacacctggtgtgcta 767

                                                                       
Query: 721 tctctgccatttcctttgaaatttcctgagaattacaagagggtgcatcgatattacaag 780
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 768 tctctgccatttcctttgaaatttcctgagaattacaagagggtgcatcgatattacaag 827

                                          
Query: 781 gaacagattcagctttttcaggagaggtctt 811
           |||||||||||||||||||||||||||||||
Sbjct: 828 gaacagattcagctttttcaggagaggtctt 858