Miyakogusa Predicted Gene
- Lj1g3v1788400.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj1g3v1788400.1 Non Chatacterized Hit- tr|I1P4V6|I1P4V6_ORYGL
Uncharacterized protein OS=Oryza glaberrima PE=4
SV=1,63.01,7e-17,seg,NULL; DUF1771,Domain of unknown function
DUF1771,CUFF.27946.1
(1467 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC64596 similar to UniRef100_A7P4V5 Cluster: Chromosome... 1063 0.0
gnl|LJGI|TC65243 similar to UniRef100_A7P4V5 Cluster: Chromosome... 537 e-152
gnl|LJGI|TC58913 similar to UniRef100_A7P4V5 Cluster: Chromosome... 416 e-115
gnl|LJGI|TC59407 similar to UniRef100_A7P4V5 Cluster: Chromosome... 280 2e-74
gnl|LJGI|TC60489 similar to UniRef100_A7P4V5 Cluster: Chromosome... 188 7e-47
gnl|LJGI|CN825374 similar to UniRef100_A7P4V5 Cluster: Chromosom... 149 6e-35
gnl|LJGI|TC62944 similar to UniRef100_A7P4V5 Cluster: Chromosome... 149 6e-35
gnl|LJGI|TC61241 similar to UniRef100_A7P4V5 Cluster: Chromosome... 149 6e-35
gnl|LJGI|BW599272 similar to UniRef100_A7P4V5 Cluster: Chromosom... 119 5e-26
gnl|LJGI|TC82669 weakly similar to UniRef100_Q69K57 Cluster: Smr... 84 3e-15
>gnl|LJGI|TC64596 similar to UniRef100_A7P4V5 Cluster: Chromosome chr4 scaffold_6,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr4 scaffold_6, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (19%)
Length = 818
Score = 1063 bits (536), Expect = 0.0
Identities = 536/536 (100%)
Strand = Plus / Plus
Query: 1 atgaatgtgtccaagaaaggattccaaatggatgcaaagctattcagcccaaacaaggca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 283 atgaatgtgtccaagaaaggattccaaatggatgcaaagctattcagcccaaacaaggca 342
Query: 61 actagtctgaatccaaatgcagcagagtttattccttttgccctcagatcaccatcatct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 343 actagtctgaatccaaatgcagcagagtttattccttttgccctcagatcaccatcatct 402
Query: 121 ggaactaccagctcggcagatgcaacagcaaagcttactacttttggagctcatgggaaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 403 ggaactaccagctcggcagatgcaacagcaaagcttactacttttggagctcatgggaaa 462
Query: 181 tcagttttaggcagatcagaatcatccaattcaaataactctgatgatgaggtgcaccag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 463 tcagttttaggcagatcagaatcatccaattcaaataactctgatgatgaggtgcaccag 522
Query: 241 tactggcgatgtcagctccctgatgatataacccctgattttgaggtcatgggagaagat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 523 tactggcgatgtcagctccctgatgatataacccctgattttgaggtcatgggagaagat 582
Query: 301 gagtctcaaggtgttaatgacctttctttgataggtttgtccatacatgatgacaatgaa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 583 gagtctcaaggtgttaatgacctttctttgataggtttgtccatacatgatgacaatgaa 642
Query: 361 acctcaacgtttccttcttcaataggaaatcgatataaaataaatgagcaggaggaatta 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 643 acctcaacgtttccttcttcaataggaaatcgatataaaataaatgagcaggaggaatta 702
Query: 421 tctcaacagcattttaatggcaacaactttgctgataaattcaagctctccaattcaagc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 703 tctcaacagcattttaatggcaacaactttgctgataaattcaagctctccaattcaagc 762
Query: 481 tacagtgaggacccgtcttctgccagctttttgaacactttggcaaagccttggga 536
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 763 tacagtgaggacccgtcttctgccagctttttgaacactttggcaaagccttggga 818
>gnl|LJGI|TC65243 similar to UniRef100_A7P4V5 Cluster: Chromosome chr4 scaffold_6,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr4 scaffold_6, whole genome shotgun sequence
- Vitis vinifera (Grape), partial (27%)
Length = 747
Score = 537 bits (271), Expect = e-152
Identities = 271/271 (100%)
Strand = Plus / Plus
Query: 1197 tgctgtttggttggaaactggtgatttagttgctaatatgcattcagagctacgggaaga 1256
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tgctgtttggttggaaactggtgatttagttgctaatatgcattcagagctacgggaaga 60
Query: 1257 ggcttgtgatcatgcacgcttacgcaatgcatattttgaacaggcacaacaagcctatct 1316
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 ggcttgtgatcatgcacgcttacgcaatgcatattttgaacaggcacaacaagcctatct 120
Query: 1317 tattggcaataaagccctagcgaaagaattaagtgttaaagggcaactgcatgacatgca 1376
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 tattggcaataaagccctagcgaaagaattaagtgttaaagggcaactgcatgacatgca 180
Query: 1377 tatggaagcagctcatggaaaagctcaggaatctatttaccaccagagaaatccagttgc 1436
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 tatggaagcagctcatggaaaagctcaggaatctatttaccaccagagaaatccagttgc 240
Query: 1437 tccagagatgcggggcaatggaagggggcat 1467
|||||||||||||||||||||||||||||||
Sbjct: 241 tccagagatgcggggcaatggaagggggcat 271
>gnl|LJGI|TC58913 similar to UniRef100_A7P4V5 Cluster: Chromosome chr4 scaffold_6,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr4 scaffold_6, whole genome shotgun sequence
- Vitis vinifera (Grape), partial (24%)
Length = 847
Score = 416 bits (210), Expect = e-115
Identities = 216/218 (99%)
Strand = Plus / Plus
Query: 1250 gggaagaggcttgtgatcatgcacgcttacgcaatgcatattttgaacaggcacaacaag 1309
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2 gggaagaggcttgtgatcatgcacgcttacgcaatgcatattttgaacaggcacaacaag 61
Query: 1310 cctatcttattggcaataaagccctagcgaaagaattaagtgttaaagggcaactgcatg 1369
||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 62 cctattttattggcaataaagccctagcgaaagaattaagtgttaaagggcagctgcatg 121
Query: 1370 acatgcatatggaagcagctcatggaaaagctcaggaatctatttaccaccagagaaatc 1429
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122 acatgcatatggaagcagctcatggaaaagctcaggaatctatttaccaccagagaaatc 181
Query: 1430 cagttgctccagagatgcggggcaatggaagggggcat 1467
||||||||||||||||||||||||||||||||||||||
Sbjct: 182 cagttgctccagagatgcggggcaatggaagggggcat 219
>gnl|LJGI|TC59407 similar to UniRef100_A7P4V5 Cluster: Chromosome chr4 scaffold_6,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr4 scaffold_6, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (33%)
Length = 1208
Score = 280 bits (141), Expect = 2e-74
Identities = 576/719 (80%), Gaps = 9/719 (1%)
Strand = Plus / Plus
Query: 68 tgaatccaaatgcagcagagtttattccttttgccctcagatcaccatcatctggaacta 127
||||||||||||||||||| ||| |||||||| |||||||| || |||||||||| ||
Sbjct: 270 tgaatccaaatgcagcagaatttgttcctttttccctcagaacattgtcatctggaagta 329
Query: 128 ccagctcggcagatgcaacagcaaagcttactacttttggagctcatgggaaatcagttt 187
| ||||||| |||||||||| | |||||||||| |||| ||| ||| ||| ||||||
Sbjct: 330 ctagctcggtagatgcaaca---aggcttactactgctggaactcttggaaaagcagttt 386
Query: 188 taggcagatcagaatcatccaattcaaataactctgatgatgaggtgcaccagtactggc 247
||| | ||||||| |||| ||||||||| || |||||||||| |||||||||||||
Sbjct: 387 tagatcgtacagaatcgtccatttcaaataattcagatgatgaggcccaccagtactggc 446
Query: 248 gatgtcagctccctgatgatataacccctgattttgaggtcatgggagaaga---tgagt 304
| ||||| |||||||||||||| || ||||| || |||||||||| ||||| ||| |
Sbjct: 447 gttgtcaactccctgatgatatcactcctgacttcaaggtcatgggtgaagatattgaat 506
Query: 305 ctcaaggtgttaatgacctttctttgataggtttgtccatacatgatgacaatgaaacct 364
| | |||| |||| |||| ||||| ||| || || ||| | ||||| |||||| ||
Sbjct: 507 ccccaggtcttaacaacctctctttagcaggcttatcaatagaagatgataatgaatccc 566
Query: 365 caacgtttccttcttcaataggaaatcgatataaaataaatgagcaggaggaattatctc 424
||| ||||| || || | |||| | ||||| | ||||||||| ||||||||||||
Sbjct: 567 caagctttccatcctctaagggaagtagatatttgttgaatgagcagcaggaattatctc 626
Query: 425 aacagcattttaatggcaacaactttgctgataaattcaagctctccaattcaagctaca 484
|| |||| | |||||||| ||||||||||| || | | | |||| ||||| |||||
Sbjct: 627 aaaagcacctgaatggcaatgcctttgctgatacgttaaggttttccagttcaacctaca 686
Query: 485 gtgaggacccgtcttctgccagctttttgaacactttggcaaagccttgggataggccaa 544
| ||||| || ||||| | ||||||||||| ||| || ||||||||||||||||||| |
Sbjct: 687 gggaggaaccatcttcaggcagctttttgagcacattagcaaagccttgggataggcaag 746
Query: 545 ttgggagtgtcaaccagcatattagcagtggtctagaggggcttaattctgatgacaact 604
|||| | || ||||| |||| |||||||||||| ||||| ||| || ||||||||||
Sbjct: 747 ttggaaatgccaacctgcatgttagcagtggtcaagaggaacttgcttatgatgacaaca 806
Query: 605 ctagacatggattcttagatgatgttttggctgagaatg---caattgtggatgacacta 661
|| ||||||||| ||| |||||||||||| |||||||| | || |||||||| ||
Sbjct: 807 ttacacatggattgttaaatgatgttttgggtgagaatgctactatggtggatgatacgg 866
Query: 662 atttgaatcctttggaatttctagcttctctgtttcctggttttgctgcagaaagtcttg 721
||| || || ||||||||| |||||||||| || ||||||||||| ||||||| ||||
Sbjct: 867 gttttaacccattggaatttttagcttctctattccctggttttgcatcagaaagccttg 926
Query: 722 cagaagtttactttgccaatggatgcaatctgcatttgaccagtgagatgctcactcag 780
| ||||||||||||||| |||||||| || | ||| |||||| ||| ||||||||||||
Sbjct: 927 ctgaagtttactttgcccatggatgcgattttcatctgaccattgaaatgctcactcag 985
>gnl|LJGI|TC60489 similar to UniRef100_A7P4V5 Cluster: Chromosome chr4 scaffold_6,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr4 scaffold_6, whole genome shotgun sequence
- Vitis vinifera (Grape), partial (27%)
Length = 884
Score = 188 bits (95), Expect = 7e-47
Identities = 176/203 (86%)
Strand = Plus / Plus
Query: 1228 gctaatatgcattcagagctacgggaagaggcttgtgatcatgcacgcttacgcaatgca 1287
|||||||||||||| || || ||||| ||||| |||||||||||||| | || ||||||
Sbjct: 15 gctaatatgcattctgatctgcgggaggaggcacgtgatcatgcacgcctgcgtaatgca 74
Query: 1288 tattttgaacaggcacaacaagcctatcttattggcaataaagccctagcgaaagaatta 1347
|||||||| ||||||| ||||||||| |||||||||||||| ||||| || || || ||
Sbjct: 75 tattttgagcaggcacgacaagcctaccttattggcaataaggcccttgcaaaggagcta 134
Query: 1348 agtgttaaagggcaactgcatgacatgcatatggaagcagctcatggaaaagctcaggaa 1407
|||| ||||||||||||||| ||||||||||| |||||||||||||||| ||||| |||
Sbjct: 135 agtgctaaagggcaactgcacaacatgcatatgaaagcagctcatggaaaggctcaagaa 194
Query: 1408 tctatttaccaccagagaaatcc 1430
|||||||||| ||||| |||||
Sbjct: 195 tctatttaccgtcagaggaatcc 217
>gnl|LJGI|CN825374 similar to UniRef100_A7P4V5 Cluster: Chromosome chr4 scaffold_6,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr4 scaffold_6, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (16%)
Length = 718
Score = 149 bits (75), Expect = 6e-35
Identities = 194/233 (83%), Gaps = 3/233 (1%)
Strand = Plus / Plus
Query: 68 tgaatccaaatgcagcagagtttattccttttgccctcagatcaccatcatctggaacta 127
||||||||||||||||||| ||| |||||||| |||||||| || |||||||||| ||
Sbjct: 404 tgaatccaaatgcagcagaatttgttcctttttccctcagaacattgtcatctggaagta 463
Query: 128 ccagctcggcagatgcaacagcaaagcttactacttttggagctcatgggaaatcagttt 187
| ||||||| |||||||||| | |||||||||| |||| ||| ||| ||| ||||||
Sbjct: 464 ctagctcggtagatgcaaca---aggcttactactgctggaactcttggaaaagcagttt 520
Query: 188 taggcagatcagaatcatccaattcaaataactctgatgatgaggtgcaccagtactggc 247
||| | ||||||| |||| ||||||||| || |||||||||| |||||||||||||
Sbjct: 521 tagatcgtacagaatcgtccatttcaaataattcagatgatgaggcccaccagtactggc 580
Query: 248 gatgtcagctccctgatgatataacccctgattttgaggtcatgggagaagat 300
| ||||| |||||||||||||| || ||||| || |||||||||| ||||||
Sbjct: 581 gttgtcaactccctgatgatatcactcctgacttcaaggtcatgggtgaagat 633
>gnl|LJGI|TC62944 similar to UniRef100_A7P4V5 Cluster: Chromosome chr4 scaffold_6,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr4 scaffold_6, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (13%)
Length = 728
Score = 149 bits (75), Expect = 6e-35
Identities = 194/233 (83%), Gaps = 3/233 (1%)
Strand = Plus / Plus
Query: 68 tgaatccaaatgcagcagagtttattccttttgccctcagatcaccatcatctggaacta 127
||||||||||||||||||| ||| |||||||| |||||||| || |||||||||| ||
Sbjct: 481 tgaatccaaatgcagcagaatttgttcctttttccctcagaacattgtcatctggaagta 540
Query: 128 ccagctcggcagatgcaacagcaaagcttactacttttggagctcatgggaaatcagttt 187
| ||||||| |||||||||| | |||||||||| |||| ||| ||| ||| ||||||
Sbjct: 541 ctagctcggtagatgcaaca---aggcttactactgctggaactcttggaaaagcagttt 597
Query: 188 taggcagatcagaatcatccaattcaaataactctgatgatgaggtgcaccagtactggc 247
||| | ||||||| |||| ||||||||| || |||||||||| |||||||||||||
Sbjct: 598 tagatcgtacagaatcgtccatttcaaataattcagatgatgaggcccaccagtactggc 657
Query: 248 gatgtcagctccctgatgatataacccctgattttgaggtcatgggagaagat 300
| ||||| |||||||||||||| || ||||| || |||||||||| ||||||
Sbjct: 658 gttgtcaactccctgatgatatcactcctgacttcaaggtcatgggtgaagat 710
>gnl|LJGI|TC61241 similar to UniRef100_A7P4V5 Cluster: Chromosome chr4 scaffold_6,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr4 scaffold_6, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (23%)
Length = 836
Score = 149 bits (75), Expect = 6e-35
Identities = 194/233 (83%), Gaps = 3/233 (1%)
Strand = Plus / Plus
Query: 68 tgaatccaaatgcagcagagtttattccttttgccctcagatcaccatcatctggaacta 127
||||||||||||||||||| ||| |||||||| |||||||| || |||||||||| ||
Sbjct: 371 tgaatccaaatgcagcagaatttgttcctttttccctcagaacattgtcatctggaagta 430
Query: 128 ccagctcggcagatgcaacagcaaagcttactacttttggagctcatgggaaatcagttt 187
| ||||||| |||||||||| | |||||||||| |||| ||| ||| ||| ||||||
Sbjct: 431 ctagctcggtagatgcaaca---aggcttactactgctggaactcttggaaaagcagttt 487
Query: 188 taggcagatcagaatcatccaattcaaataactctgatgatgaggtgcaccagtactggc 247
||| | ||||||| |||| ||||||||| || |||||||||| |||||||||||||
Sbjct: 488 tagatcgtacagaatcgtccatttcaaataattcagatgatgaggcccaccagtactggc 547
Query: 248 gatgtcagctccctgatgatataacccctgattttgaggtcatgggagaagat 300
| ||||| |||||||||||||| || ||||| || |||||||||| ||||||
Sbjct: 548 gttgtcaactccctgatgatatcactcctgacttcaaggtcatgggtgaagat 600
>gnl|LJGI|BW599272 similar to UniRef100_A7P4V5 Cluster: Chromosome chr4 scaffold_6,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr4 scaffold_6, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (15%)
Length = 456
Score = 119 bits (60), Expect = 5e-26
Identities = 229/285 (80%), Gaps = 9/285 (3%)
Strand = Plus / Plus
Query: 609 acatggattcttagatgatgttttggctgagaatgcaatt---gtggatgacactaattt 665
||||||||| ||| |||||||||||| ||||||||| | | |||||||| || |||
Sbjct: 79 acatggattgttacatgatgttttgggtgagaatgctactatggtggatgatacgggttt 138
Query: 666 gaatcctttggaatttctagcttctctgtttcctggttttgctgcagaaagtcttgcaga 725
|| || ||| ||||| |||||||||| || ||||| ||||| ||||||| | ||| ||
Sbjct: 139 taacccattgcaatttttagcttctctattccctggatttgcatcagaaagccatgctga 198
Query: 726 agtttactttgccaatggatgcaatctgcatttgaccagtgagatgctcactc------a 779
|||||||||||||||||||||| || | ||| |||||| ||| |||||||||| |
Sbjct: 199 agtttactttgccaatggatgccattttcatctgaccattgaaatgctcactcacttaga 258
Query: 780 gcttcaagatgatggcagtttcaatcagaatccgaattccaagactctttcagctcccaa 839
| |||||| |||||| |||||| |||||| || | | | |||||||| || ||||||||
Sbjct: 259 gattcaagttgatggtggtttcagtcagaacccaagtccaaagactctgtctgctcccaa 318
Query: 840 tctcagtgcaatggacttccctgcacttgcttcatcagatggcca 884
||| | |||||||||||| || |||||| ||||| || |||||||
Sbjct: 319 tcttactgcaatggactttccagcactttcttcaccaaatggcca 363
>gnl|LJGI|TC82669 weakly similar to UniRef100_Q69K57 Cluster: Smr domain-containing
protein-like; n=2; Oryza sativa|Rep: Smr
domain-containing protein-like - Oryza sativa subsp.
japonica (Rice), partial (16%)
Length = 633
Score = 83.8 bits (42), Expect = 3e-15
Identities = 44/45 (97%)
Strand = Plus / Plus
Query: 1423 agaaatccagttgctccagagatgcggggcaatggaagggggcat 1467
|||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 77 agaaatccagttgctccagagatgcgggncaatggaagggggcat 121